RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 H0Y3Z8 333 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 SCDO00767 359 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 CPSF4O95639 269 aaKnown RBP10.11□□□□□ -0.79
SMAD4-211ENST00000590499 NPIPA8P0DM63 369 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 COX6B1P14854 86 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 MATN1P21941 496 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 UQCRC2P22695 453 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 ZNF136P52737 540 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 PPP2R2AP63151 447 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 FUT5Q11128 374 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 RCAN2Q14206 197 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 GSTA3Q16772 222 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 KLHL26Q53HC5 615 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 RAET1LQ5VY80 246 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 AP1ARQ63HQ0 302 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 NXNQ6DKJ4 435 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 HEPHL1Q6MZM0 1159 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 Q6ZS46 218 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 MISPQ8IVT2 679 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 GLB1L3Q8NCI6 653 aaPredicted RBP10.11□□□□□ -0.79
SMAD4-211ENST00000590499 LRRC8CQ8TDW0 803 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 CHMP6Q96FZ7 201 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 MARK4Q96L34 752 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 TRIB1Q96RU8 372 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 ZNF350Q9GZX5 532 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 OR51I1Q9H343 314 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 ZIM2Q9NZV7 527 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 PCDHGB4Q9UN71 923 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 MPDZO75970 2070 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 A0A087WZY1 265 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 PRAMEF27A3QJZ7 478 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 DUXAA6NLW8 204 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 CLCA1A8K7I4 914 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 UBDO15205 165 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 TGDSO95455 350 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 AK1P00568 194 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 GUSBP08236 651 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 SNRPB2P08579 225 aaKnown RBP10.1□□□□□ -0.79
SMAD4-211ENST00000590499 PEPDP12955 493 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 ZNF17P17021 662 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 FSTP19883 344 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 POU3F2P20265 443 aaPredicted RBP10.1□□□□□ -0.79
SMAD4-211ENST00000590499 ATP6V1C1P21283 382 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 PSMA4P25789 261 aaKnown RBP10.1□□□□□ -0.79
SMAD4-211ENST00000590499 CDKN2CP42773 168 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 MRPL19P49406 292 aaKnown RBP10.1□□□□□ -0.79
SMAD4-211ENST00000590499 SUCLG1P53597 346 aaKnown RBP10.1□□□□□ -0.79
SMAD4-211ENST00000590499 ATP12AP54707 1039 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 ZNF117Q03924 483 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 SRYQ05066 204 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 PLPPR5Q32ZL2 321 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 ARHGAP11BQ3KRB8 267 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 FBXL19-AS1Q494R0 122 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 FLYWCH1Q4VC44 716 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 PLXDC2Q6UX71 529 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 MTERF4Q7Z6M4 381 aaKnown RBP10.1□□□□□ -0.79
SMAD4-211ENST00000590499 MCEMP1Q8IX19 187 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 GTPBP8Q8N3Z3 284 aaPredicted RBP10.1□□□□□ -0.79
SMAD4-211ENST00000590499 OR5M1Q8NGP8 315 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 OR9I1Q8NGQ6 314 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 OR52E6Q96RD3 313 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 NPAS1Q99742 590 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 PIGQQ9BRB3 760 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 SLC35A5Q9BS91 424 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 INPP5KQ9BT40 448 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 NMUR2Q9GZQ4 415 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 HOXD1Q9GZZ0 328 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 ADAM19Q9H013 955 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 MED17Q9NVC6 651 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 ZNF446Q9NWS9 450 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 ZNF629Q9UEG4 869 aaPredicted RBP10.1□□□□□ -0.79
SMAD4-211ENST00000590499 KCNE5Q9UJ90 142 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 ICAM5Q9UMF0 924 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 ZNF337Q9Y3M9 751 aa10.1□□□□□ -0.79
SMAD4-211ENST00000590499 HRNRQ86YZ3 2850 aaPredicted RBP10.1□□□□□ -0.79
SMAD4-211ENST00000590499 CCDC168Q8NDH2 2452 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 OTOGQ6ZRI0 2925 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 CENPVL1A0A0U1RR11 272 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 CCDC154A6NI56 674 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 H0YC42 278 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 DVL2O14641 736 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 GMFGO60234 142 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 KIAA0513O60268 411 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 FCMRO60667 390 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 DIAPH2O60879 1101 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 TNFRSF21O75509 655 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 STX11O75558 287 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 SLC22A3O75751 556 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 RCBTB2O95199 551 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 AGR2O95994 175 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 IL18BPO95998 194 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 IL6P05231 212 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 LINGO3P0C6S8 592 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 OR12D1P0DN82 309 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 HPGDP15428 266 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 CTSSP25774 331 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 CASP9P55211 416 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 TPD52P55327 224 aaPredicted RBP10.09□□□□□ -0.79
SMAD4-211ENST00000590499 DLX5P56178 289 aa10.09□□□□□ -0.79
SMAD4-211ENST00000590499 CLDN20P56880 219 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms