RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, human

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-213	ENST00000589933	PTH2R	P49190	550 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	ZNF239	Q16600	458 aa	Known RBP	18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	TMEM176B	Q3YBM2	270 aa	Predicted RBP	18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	KLHL26	Q53HC5	615 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	IL23R	Q5VWK5	629 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	TMCO5A	Q8N6Q1	288 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	TOR1AIP2	Q8NFQ8	470 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	FBXO27	Q8NI29	283 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	PSMA8	Q8TAA3	256 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	RNF128	Q8TEB7	428 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	ROBO4	Q8WZ75	1007 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	TUBGCP3	Q96CW5	907 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	MRGPRX4	Q96LA9	322 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	NPAS1	Q99742	590 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	C1orf50	Q9BV19	199 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	MECR	Q9BV79	373 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	L2HGDH	Q9H9P8	463 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	CARD8	Q9Y2G2	431 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	DTNA	Q9Y4J8	743 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	FREM1	Q5H8C1	2179 aa		18.82	■□□□□ 0.6
TMC6-213	ENST00000589933	DUXA	A6NLW8	204 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	HS3ST1	O14792	307 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	LY6G6D	O95868	133 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	C6orf47	O95873	294 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	SELENBP1	Q13228	472 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	PTGR1	Q14914	329 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	XKR7	Q5GH72	579 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	C6orf136	Q5SQH8	315 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	C22orf34	Q6ZV56	151 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	FCRLA	Q7L513	359 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	ZNF611	Q8N823	705 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	ATP6V1C2	Q8NEY4	427 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	PPP1R14C	Q8TAE6	165 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	TCP10L	Q8TDR4	215 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	COQ8B	Q96D53	544 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	DUSP26	Q9BV47	211 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	ROPN1B	Q9BZX4	212 aa	Predicted RBP	18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	BHLHE41	Q9C0J9	482 aa	Predicted RBP	18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	ROPN1	Q9HAT0	212 aa	Predicted RBP	18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	KLHL13	Q9P2N7	655 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	SLC17A7	Q9P2U7	560 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	PCDHGB4	Q9UN71	923 aa		18.81	■□□□□ 0.6
TMC6-213	ENST00000589933	ABCA2	Q9BZC7	2435 aa		18.8	■□□□□ 0.6
TMC6-213	ENST00000589933	ZNF264	O43296	627 aa		18.8	■□□□□ 0.6
TMC6-213	ENST00000589933	EIF4E2	O60573	245 aa	Known RBP	18.8	■□□□□ 0.6
TMC6-213	ENST00000589933	SKAP2	O75563	359 aa	Predicted RBP	18.8	■□□□□ 0.6
TMC6-213	ENST00000589933	AK1	P00568	194 aa		18.8	■□□□□ 0.6
TMC6-213	ENST00000589933	SOAT1	P35610	550 aa		18.8	■□□□□ 0.6
TMC6-213	ENST00000589933	CCR4	P51679	360 aa		18.8	■□□□□ 0.6
TMC6-213	ENST00000589933	PPP2R2B	Q00005	443 aa		18.8	■□□□□ 0.6
TMC6-213	ENST00000589933	CBFB	Q13951	182 aa		18.8	■□□□□ 0.6
TMC6-213	ENST00000589933	ALKBH2	Q6NS38	261 aa		18.8	■□□□□ 0.6
TMC6-213	ENST00000589933	RFWD2	Q8NHY2	731 aa		18.8	■□□□□ 0.6
TMC6-213	ENST00000589933	ZFP90	Q8TF47	636 aa		18.8	■□□□□ 0.6
TMC6-213	ENST00000589933	ABHD3	Q8WU67	409 aa		18.8	■□□□□ 0.6
TMC6-213	ENST00000589933	ESRP2	Q9H6T0	727 aa	Known RBP	18.8	■□□□□ 0.6
TMC6-213	ENST00000589933	CXorf36	Q9H7Y0	433 aa		18.8	■□□□□ 0.6
TMC6-213	ENST00000589933	KLHL9	Q9P2J3	617 aa		18.8	■□□□□ 0.6
TMC6-213	ENST00000589933	ICAM5	Q9UMF0	924 aa		18.8	■□□□□ 0.6
TMC6-213	ENST00000589933	NPIPA5	A0A0B4J1W7	369 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	NPIPA7	E9PJI5	369 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	SPAG7	O75391	227 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	CNOT4	O95628	575 aa	Known RBP	18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	FES	P07332	822 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	YES1	P07947	543 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	NUDT17	P0C025	328 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	NPIPA8	P0DM63	369 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	UBL4A	P11441	157 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	P2RY6	Q15077	328 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	CBLN3	Q6UW01	205 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	ZCCHC23	Q6ZST2	131 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	TUSC5	Q8IXB3	177 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	LRRN4CL	Q8ND94	238 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	OR5W2	Q8NH69	310 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	OR2W6P	Q8NHA6	318 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	GPR119	Q8TDV5	335 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	HSD17B8	Q92506	261 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	S100PBP	Q96BU1	408 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	ARSG	Q96EG1	525 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	OR7D2	Q96RA2	312 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	SERINC1	Q9NRX5	453 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	GPATCH2	Q9NW75	528 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	GIMAP2	Q9UG22	337 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	LGALS13	Q9UHV8	139 aa		18.79	■□□□□ 0.6
TMC6-213	ENST00000589933	PRR14L	Q5THK1	2151 aa		18.78	■□□□□ 0.6
TMC6-213	ENST00000589933	CD3E	P07766	207 aa		18.78	■□□□□ 0.6
TMC6-213	ENST00000589933	PAX1	P15863	534 aa		18.78	■□□□□ 0.6
TMC6-213	ENST00000589933	PRKCA	P17252	672 aa		18.78	■□□□□ 0.6
TMC6-213	ENST00000589933	ATP5J2	P56134	94 aa		18.78	■□□□□ 0.6
TMC6-213	ENST00000589933	RAC3	P60763	192 aa		18.78	■□□□□ 0.6
TMC6-213	ENST00000589933	RPS4X	P62701	263 aa	Known RBP	18.78	■□□□□ 0.6
TMC6-213	ENST00000589933	CAPRIN1	Q14444	709 aa	Known RBP	18.78	■□□□□ 0.6
TMC6-213	ENST00000589933	PGS1	Q32NB8	556 aa		18.78	■□□□□ 0.6
TMC6-213	ENST00000589933	SFRP5	Q5T4F7	317 aa		18.78	■□□□□ 0.6
TMC6-213	ENST00000589933	TFAP2E	Q6VUC0	442 aa		18.78	■□□□□ 0.6
TMC6-213	ENST00000589933	TMEM234	Q8WY98	164 aa		18.78	■□□□□ 0.6
TMC6-213	ENST00000589933	AKAP1	Q92667	903 aa	Known RBP eCLIP	18.78	■□□□□ 0.6	3e-6	■■■□□ 14.8
TMC6-213	ENST00000589933	KISS1R	Q969F8	398 aa	Predicted RBP	18.78	■□□□□ 0.6
TMC6-213	ENST00000589933	TRMT61A	Q96FX7	289 aa	Known RBP	18.78	■□□□□ 0.6
TMC6-213	ENST00000589933	EXD2	Q9NVH0	621 aa		18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms