RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 FAM71CQ8NEG0 241 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 OR5W2Q8NH69 310 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 TPD52L3Q96J77 140 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 LRGUKQ96M69 825 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 TAAR6Q96RI8 345 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 TRIM15Q9C019 465 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 ZNF703Q9H7S9 590 aaPredicted RBP12.4□□□□□ -0.42
VMP1-210ENST00000589823 QPCTLQ9NXS2 382 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 ICAM5Q9UMF0 924 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 SAMD4AQ9UPU9 718 aaKnown RBP12.4□□□□□ -0.42
VMP1-210ENST00000589823 HRH3Q9Y5N1 445 aa12.4□□□□□ -0.42
VMP1-210ENST00000589823 CFAP73A6NFT4 308 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 TTLL8A6PVC2 850 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 CDC40O60508 579 aaKnown RBP eCLIP12.39□□□□□ -0.43
VMP1-210ENST00000589823 BCAS1O75363 584 aaPredicted RBP12.39□□□□□ -0.43
VMP1-210ENST00000589823 TRAPPC6AO75865 159 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 LGI1O95970 557 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 FESP07332 822 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 LINGO3P0C6S8 592 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 PGCP20142 388 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 DPP4P27487 766 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 SRD5A2P31213 254 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 RYKP34925 604 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 MAGEA5P43359 124 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 CRYBA2P53672 197 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 TRAP1Q12931 704 aaKnown RBP12.39□□□□□ -0.43
VMP1-210ENST00000589823 SLC10A1Q14973 349 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 GLIPR1L2Q4G1C9 344 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 MTX3Q5HYI7 312 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 CYP2R1Q6VVX0 501 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 CBLL1Q75N03 491 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 GPR32P1Q8NGA4 272 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 SLC35B4Q969S0 331 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 ARSGQ96EG1 525 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 C1GALT1C1Q96EU7 318 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 AGPAT4Q9NRZ5 378 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 DCAF13Q9NV06 445 aaKnown RBP12.39□□□□□ -0.43
VMP1-210ENST00000589823 SLC9A8Q9Y2E8 581 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 CHST2Q9Y4C5 530 aa12.39□□□□□ -0.43
VMP1-210ENST00000589823 EML6Q6ZMW3 1958 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 A0A087WZY1 265 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 FRS3O43559 492 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 CIB2O75838 187 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 GKN3PP0CG01 181 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 HK1P19367 917 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 GCKP35557 465 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 RGS8P57771 180 aaPredicted RBP12.38□□□□□ -0.43
VMP1-210ENST00000589823 MS4A2Q01362 244 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 PLAURQ03405 335 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 EPS8Q12929 822 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 RNFT1Q5M7Z0 435 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 LCN8Q6JVE9 175 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 FKBP9P1Q75LS8 142 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 SPPL2CQ8IUH8 684 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 FAM83FQ8NEG4 500 aaPredicted RBP12.38□□□□□ -0.43
VMP1-210ENST00000589823 OR52E4Q8NGH9 312 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 OR14L1PQ8NHC6 308 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 ZNF563Q8TA94 476 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 VANGL1Q8TAA9 524 aaPredicted RBP12.38□□□□□ -0.43
VMP1-210ENST00000589823 GPR119Q8TDV5 335 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 SNRNP40Q96DI7 357 aaKnown RBP12.38□□□□□ -0.43
VMP1-210ENST00000589823 ARHGDIGQ99819 225 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 RSPO3Q9BXY4 272 aaPredicted RBP12.38□□□□□ -0.43
VMP1-210ENST00000589823 DEFB127Q9H1M4 99 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 UBQLN3Q9H347 655 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 OLAHQ9NV23 265 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 MED17Q9NVC6 651 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 TAS2R10Q9NYW0 307 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 PRDM4Q9UKN5 801 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 VDAC3Q9Y277 283 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 SH3GLB1Q9Y371 365 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 MRPS18CQ9Y3D5 142 aaKnown RBP12.38□□□□□ -0.43
VMP1-210ENST00000589823 NINQ8N4C6 2090 aa12.38□□□□□ -0.43
VMP1-210ENST00000589823 EIF4E1BA6NMX2 242 aaKnown RBP12.37□□□□□ -0.43
VMP1-210ENST00000589823 B4DXG7 233 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 NPIPA5E9PKD4 350 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 M0R3H8 397 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 AP3D1O14617 1153 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 ACOT8O14734 319 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 EPPINO95925 133 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 HPNP05981 417 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 ATP6V1B2P21281 511 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 IDH2P48735 452 aaKnown RBP12.37□□□□□ -0.43
VMP1-210ENST00000589823 COPZ1P61923 177 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 FLOT2Q14254 428 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 QPRTQ15274 297 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 NRF1Q16656 503 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 IFI44LQ53G44 452 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 ARSKQ6UWY0 536 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 COMTD1Q86VU5 262 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 RANBP3LQ86VV4 465 aaPredicted RBP12.37□□□□□ -0.43
VMP1-210ENST00000589823 CARM1Q86X55 608 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 OR10Q1Q8NGQ4 319 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 FAR1Q8WVX9 515 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 GEMIN6Q8WXD5 167 aaKnown RBP12.37□□□□□ -0.43
VMP1-210ENST00000589823 TMEM234Q8WY98 164 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 NR4A3Q92570 626 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 POP5Q969H6 163 aaKnown RBP12.37□□□□□ -0.43
VMP1-210ENST00000589823 ZBTB8AQ96BR9 441 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 HSH2DQ96JZ2 352 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms