RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ZNF764Q96H86 408 aaPredicted RBP12.21□□□□□ -0.45
HDAC5-208ENST00000588419 MECRQ9BV79 373 aa12.21□□□□□ -0.45
HDAC5-208ENST00000588419 KLHL13Q9P2N7 655 aa12.21□□□□□ -0.45
HDAC5-208ENST00000588419 FAF1Q9UNN5 650 aaPredicted RBP12.21□□□□□ -0.45
HDAC5-208ENST00000588419 TMED5Q9Y3A6 229 aa12.21□□□□□ -0.45
HDAC5-208ENST00000588419 DNAJC15Q9Y5T4 150 aa12.21□□□□□ -0.45
HDAC5-208ENST00000588419 HIVEP2P31629 2446 aa12.21□□□□□ -0.46
HDAC5-208ENST00000588419 A0A1W2PNR3 127 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 TLDC2A0PJX2 215 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 GJE1A6NN92 205 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 TMEM114B3SHH9 223 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 RNF223E7ERA6 249 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 NPIPB8E9PQR5 432 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 H3BNH8 94 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 KIF2AO00139 706 aaPredicted RBP12.2□□□□□ -0.46
HDAC5-208ENST00000588419 ZNF195O14628 629 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 TRIM13O60858 407 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 PEX11AO75192 247 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 C6orf47O95873 294 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 ADAP00813 363 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 CD3EP07766 207 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 LAMP1P11279 417 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 ELK4P28324 431 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 MAPK1P28482 360 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 EIF1P41567 113 aaKnown RBP12.2□□□□□ -0.46
HDAC5-208ENST00000588419 P2RX1P51575 399 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 TNK1Q13470 666 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 RNPS1Q15287 305 aaKnown RBP12.2□□□□□ -0.46
HDAC5-208ENST00000588419 TOMM34Q15785 309 aaPredicted RBP12.2□□□□□ -0.46
HDAC5-208ENST00000588419 CLEC12BQ2HXU8 276 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 ADAM5Q6NVV9 412 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 ZCCHC12Q6PEW1 402 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 ZCCHC23Q6ZST2 131 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 ATG4DQ86TL0 474 aaPredicted RBP12.2□□□□□ -0.46
HDAC5-208ENST00000588419 CNPY4Q8N129 248 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 KBTBD8Q8NFY9 601 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 OR2W6PQ8NHA6 318 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 KISS1RQ969F8 398 aaPredicted RBP12.2□□□□□ -0.46
HDAC5-208ENST00000588419 MTERF3Q96E29 417 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 STACQ99469 402 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 MDFIQ99750 246 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 PIGUQ9H490 435 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 CXorf36Q9H7Y0 433 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 ANKZF1Q9H8Y5 726 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 DUSP22Q9NRW4 184 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 NTMQ9P121 344 aa12.2□□□□□ -0.46
HDAC5-208ENST00000588419 CSPG4Q6UVK1 2322 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 A0A1W2PP18 115 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 C9JVG2 144 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 GCM2O75603 506 aaPredicted RBP12.19□□□□□ -0.46
HDAC5-208ENST00000588419 LYZL6O75951 148 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 HSPA4LO95757 839 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 ALDH3A1P30838 453 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 LCN1P31025 176 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 RPL3P39023 403 aaKnown RBP12.19□□□□□ -0.46
HDAC5-208ENST00000588419 CCT3P49368 545 aaKnown RBP12.19□□□□□ -0.46
HDAC5-208ENST00000588419 SELENBP1Q13228 472 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 PTGR1Q14914 329 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 TAB1Q15750 504 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 ATP6AP1LQ52LC2 224 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.19□□□□□ -0.46
HDAC5-208ENST00000588419 SFRP5Q5T4F7 317 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 MTERF4Q7Z6M4 381 aaKnown RBP12.19□□□□□ -0.46
HDAC5-208ENST00000588419 FNDC5Q8NAU1 212 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 OR56A1Q8NGH5 318 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 OR5D16Q8NGK9 328 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 ZNF775Q96BV0 537 aaPredicted RBP12.19□□□□□ -0.46
HDAC5-208ENST00000588419 TRMT61AQ96FX7 289 aaKnown RBP12.19□□□□□ -0.46
HDAC5-208ENST00000588419 APOPT1Q96IL0 206 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 PPP3R2Q96LZ3 170 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 TMEM204Q9BSN7 226 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 TRMOQ9BU70 441 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 ACTRT3Q9BYD9 372 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 OR10A4Q9H209 315 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 ESRP2Q9H6T0 727 aaKnown RBP12.19□□□□□ -0.46
HDAC5-208ENST00000588419 COQ10BQ9H8M1 238 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 NGBQ9NPG2 151 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 ZNF701Q9NV72 531 aaPredicted RBP12.19□□□□□ -0.46
HDAC5-208ENST00000588419 ATP6V1HQ9UI12 483 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 PRSS50Q9UI38 385 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 TRAF6Q9Y4K3 522 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 MAGED1Q9Y5V3 778 aaPredicted RBP12.19□□□□□ -0.46
HDAC5-208ENST00000588419 GPC6Q9Y625 555 aaPredicted RBP12.19□□□□□ -0.46
HDAC5-208ENST00000588419 KCNE3Q9Y6H6 103 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 DNHD1Q96M86 4753 aa12.19□□□□□ -0.46
HDAC5-208ENST00000588419 EFNA2O43921 213 aa12.18□□□□□ -0.46
HDAC5-208ENST00000588419 SPAG7O75391 227 aa12.18□□□□□ -0.46
HDAC5-208ENST00000588419 PRKD3O94806 890 aa12.18□□□□□ -0.46
HDAC5-208ENST00000588419 SLU7O95391 586 aaKnown RBP12.18□□□□□ -0.46
HDAC5-208ENST00000588419 SOD3P08294 240 aa12.18□□□□□ -0.46
HDAC5-208ENST00000588419 KRT16P08779 473 aa12.18□□□□□ -0.46
HDAC5-208ENST00000588419 UBL4AP11441 157 aa12.18□□□□□ -0.46
HDAC5-208ENST00000588419 PRKCAP17252 672 aa12.18□□□□□ -0.46
HDAC5-208ENST00000588419 ENPP1P22413 925 aa12.18□□□□□ -0.46
HDAC5-208ENST00000588419 RPS26P62854 115 aaKnown RBP12.18□□□□□ -0.46
HDAC5-208ENST00000588419 BSPH1Q075Z2 132 aa12.18□□□□□ -0.46
HDAC5-208ENST00000588419 DMTNQ08495 405 aa12.18□□□□□ -0.46
HDAC5-208ENST00000588419 QPRTQ15274 297 aa12.18□□□□□ -0.46
HDAC5-208ENST00000588419 ARL13AQ5H913 290 aaPredicted RBP12.18□□□□□ -0.46
HDAC5-208ENST00000588419 PDZK1Q5T2W1 519 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms