RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 FBXO27Q8NI29 283 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 PHOSPHO1Q8TCT1 267 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 JADE3Q92613 823 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 MTERF3Q96E29 417 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 FAM120BQ96EK7 910 aaKnown RBP12.48□□□□□ -0.41
DNMT1-213ENST00000587604 OTUB1Q96FW1 271 aaPredicted RBP12.48□□□□□ -0.41
DNMT1-213ENST00000587604 TSSK3Q96PN8 268 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 STACQ99469 402 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 POTEKPQ9BYX7 375 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 TRIM2Q9C040 744 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 GRIP2Q9C0E4 1043 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 HOXD1Q9GZZ0 328 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 PIGUQ9H490 435 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 HEATR1Q9H583 2144 aaKnown RBP12.48□□□□□ -0.41
DNMT1-213ENST00000587604 DUSP22Q9NRW4 184 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 OXSMQ9NWU1 459 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 TBK1Q9UHD2 729 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 BAIAP2L1Q9UHR4 511 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 ICAM5Q9UMF0 924 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 PTGDR2Q9Y5Y4 395 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 ACTL7BQ9Y614 415 aa12.48□□□□□ -0.41
DNMT1-213ENST00000587604 GPC6Q9Y625 555 aaPredicted RBP12.48□□□□□ -0.41
DNMT1-213ENST00000587604 YLPM1P49750 1951 aaKnown RBP12.47□□□□□ -0.41
DNMT1-213ENST00000587604 KIF2AO00139 706 aaPredicted RBP12.47□□□□□ -0.41
DNMT1-213ENST00000587604 NUDT14O95848 222 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 CD8AP01732 235 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 IGHV4-39P01824 125 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 HMGN2P05204 90 aaKnown RBP12.47□□□□□ -0.41
DNMT1-213ENST00000587604 ENPP1P22413 925 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 CCT5P48643 541 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 P2RX1P51575 399 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 SUMO3P55854 103 aaPredicted RBP12.47□□□□□ -0.41
DNMT1-213ENST00000587604 BSPH1Q075Z2 132 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 MLC1Q15049 377 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 KLHL26Q53HC5 615 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 CBLN3Q6UW01 205 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 SEZ6L2Q6UXD5 910 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 LRIG3Q6UXM1 1119 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 RNF165Q6ZSG1 346 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 Q6ZT83 130 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 BHLHA15Q7RTS1 189 aaPredicted RBP12.47□□□□□ -0.41
DNMT1-213ENST00000587604 ATG4DQ86TL0 474 aaPredicted RBP12.47□□□□□ -0.41
DNMT1-213ENST00000587604 ZNF619Q8N2I2 560 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 ZNF527Q8NB42 609 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 KBTBD8Q8NFY9 601 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 OR2T11Q8NH01 316 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 CDS1Q92903 461 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 C16orf45Q96MC5 204 aaPredicted RBP12.47□□□□□ -0.41
DNMT1-213ENST00000587604 ALG2Q9H553 416 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 L2HGDHQ9H9P8 463 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 BCO1Q9HAY6 547 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 YAE1D1Q9NRH1 226 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 CISD1Q9NZ45 108 aaKnown RBP12.47□□□□□ -0.41
DNMT1-213ENST00000587604 TMED5Q9Y3A6 229 aa12.47□□□□□ -0.41
DNMT1-213ENST00000587604 RNF212BA8MTL3 300 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 H3BNH8 94 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 AZIN1O14977 448 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 PLIN3O60664 434 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 ADAM11O75078 769 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 NEFHP12036 1026 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 CPA3P15088 417 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 DDX5P17844 614 aaKnown RBP12.46□□□□□ -0.41
DNMT1-213ENST00000587604 ATP6V1C1P21283 382 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 CRHR1P34998 444 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 ASMTP46597 345 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 RAC3P60763 192 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 FAPQ12884 760 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 LASP1Q14847 261 aaKnown RBP12.46□□□□□ -0.41
DNMT1-213ENST00000587604 SSX8Q7RTT4 187 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 R3HCC1LQ7Z5L2 792 aaKnown RBP12.46□□□□□ -0.41
DNMT1-213ENST00000587604 ATP6V1C2Q8NEY4 427 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 CLHC1Q8NHS4 586 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 GPR119Q8TDV5 335 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 ZFP90Q8TF47 636 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 CHMP6Q96FZ7 201 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 MRGPRX4Q96LA9 322 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 HS6ST2Q96MM7 605 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 TRAF4Q9BUZ4 470 aaPredicted RBP12.46□□□□□ -0.41
DNMT1-213ENST00000587604 TUBB1Q9H4B7 451 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 COQ10BQ9H8M1 238 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 BARX1Q9HBU1 254 aaPredicted RBP12.46□□□□□ -0.41
DNMT1-213ENST00000587604 SIRT3Q9NTG7 399 aaPredicted RBP12.46□□□□□ -0.41
DNMT1-213ENST00000587604 ZCCHC3Q9NUD5 404 aaKnown RBP12.46□□□□□ -0.41
DNMT1-213ENST00000587604 FAIMQ9NVQ4 179 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 KLHL9Q9P2J3 617 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 ING1Q9UK53 422 aaPredicted RBP12.46□□□□□ -0.41
DNMT1-213ENST00000587604 CARD8Q9Y2G2 431 aa12.46□□□□□ -0.41
DNMT1-213ENST00000587604 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.46□□□□□ -0.413e-8■■■□□ 15
DNMT1-213ENST00000587604 GTPBP1O00178 669 aaKnown RBP12.45□□□□□ -0.42
DNMT1-213ENST00000587604 LSM1O15116 133 aaKnown RBP12.45□□□□□ -0.42
DNMT1-213ENST00000587604 OIP5O43482 229 aa12.45□□□□□ -0.42
DNMT1-213ENST00000587604 RAMP1O60894 148 aa12.45□□□□□ -0.42
DNMT1-213ENST00000587604 NDUFS7O75251 213 aa12.45□□□□□ -0.42
DNMT1-213ENST00000587604 CHEK2O96017 543 aa12.45□□□□□ -0.42
DNMT1-213ENST00000587604 LINC00032P0C843 101 aa12.45□□□□□ -0.42
DNMT1-213ENST00000587604 BCKDHAP12694 445 aa12.45□□□□□ -0.42
DNMT1-213ENST00000587604 PRKCAP17252 672 aa12.45□□□□□ -0.42
DNMT1-213ENST00000587604 EFNA1P20827 205 aaPredicted RBP12.45□□□□□ -0.42
DNMT1-213ENST00000587604 OR3A2P47893 321 aa12.45□□□□□ -0.42
DNMT1-213ENST00000587604 ATP12AP54707 1039 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms