RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 GTPBP1O00178 669 aaKnown RBP18.23■□□□□ 0.51
TRIM47-204ENST00000587339 OR6B1O95007 311 aa18.23■□□□□ 0.51
TRIM47-204ENST00000587339 GABRB1P18505 474 aa18.23■□□□□ 0.51
TRIM47-204ENST00000587339 ETV5P41161 510 aa18.23■□□□□ 0.51
TRIM47-204ENST00000587339 PNLIPRP2P54317 469 aa18.23■□□□□ 0.51
TRIM47-204ENST00000587339 COPZ1P61923 177 aa18.23■□□□□ 0.51
TRIM47-204ENST00000587339 SLC35A2P78381 396 aa18.23■□□□□ 0.51
TRIM47-204ENST00000587339 NCF4Q15080 339 aa18.23■□□□□ 0.51
TRIM47-204ENST00000587339 FAM69BQ5VUD6 431 aa18.23■□□□□ 0.51
TRIM47-204ENST00000587339 DESI1Q6ICB0 168 aa18.23■□□□□ 0.51
TRIM47-204ENST00000587339 ULK3Q6PHR2 472 aa18.23■□□□□ 0.51
TRIM47-204ENST00000587339 APOOLQ6UXV4 268 aa18.23■□□□□ 0.51
TRIM47-204ENST00000587339 FAM71CQ8NEG0 241 aa18.23■□□□□ 0.51
TRIM47-204ENST00000587339 NODALQ96S42 347 aa18.23■□□□□ 0.51
TRIM47-204ENST00000587339 DUSP21Q9H596 190 aa18.23■□□□□ 0.51
TRIM47-204ENST00000587339 EGLN3Q9H6Z9 239 aa18.23■□□□□ 0.51
TRIM47-204ENST00000587339 VCX3AQ9NNX9 186 aa18.23■□□□□ 0.51
TRIM47-204ENST00000587339 ZNF264O43296 627 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 KLF4O43474 513 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 HTR1AP08908 422 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 GIPRP48546 466 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 CLDN6P56747 220 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 TEKQ02763 1124 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 PIGFQ07326 219 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 CSRP2Q16527 193 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 C12orf73Q69YU5 71 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 KIF18BQ86Y91 864 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 SPARTQ8N0X7 666 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 NUBPLQ8TB37 319 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 TEX47Q8TBZ9 253 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 MPP4Q96JB8 637 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 HS6ST2Q96MM7 605 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 PHOX2BQ99453 314 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 ZPBPQ9BS86 351 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 CCDC90BQ9GZT6 254 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 DSN1Q9H410 356 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 SELENONQ9NZV5 590 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 MED31Q9Y3C7 131 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 PTRH2Q9Y3E5 179 aaKnown RBP18.22■□□□□ 0.51
TRIM47-204ENST00000587339 SNX5Q9Y5X3 404 aa18.22■□□□□ 0.51
TRIM47-204ENST00000587339 TRBV11-1A0A0K0K1C0 115 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 KPNA4O00629 521 aaPredicted RBP18.21■□□□□ 0.51
TRIM47-204ENST00000587339 STK17BO94768 372 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 JMJD7P0C870 316 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 STAT5AP42229 794 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 SLC26A5P58743 744 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 GINS1Q14691 196 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 KIRREL2Q6UWL6 708 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 IQCF1Q8N6M8 205 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 POGLUT1Q8NBL1 392 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 THAP3Q8WTV1 239 aaPredicted RBP18.21■□□□□ 0.51
TRIM47-204ENST00000587339 TMIGD2Q96BF3 282 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 PLA2G12AQ9BZM1 189 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 PISDQ9UG56 409 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 CARD8Q9Y2G2 431 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 KLF7O75840 302 aaPredicted RBP18.21■□□□□ 0.51
TRIM47-204ENST00000587339 SMSP52788 366 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 CDK5Q00535 292 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 SKP2Q13309 424 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 NEDD8Q15843 81 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 CDCP2Q5VXM1 449 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 CBLN3Q6UW01 205 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 CDK20Q8IZL9 346 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 OR8K3Q8NH51 312 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 PFN4Q8NHR9 129 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 TRUB1Q8WWH5 349 aaKnown RBP18.21■□□□□ 0.51
TRIM47-204ENST00000587339 LIN37Q96GY3 246 aaPredicted RBP18.21■□□□□ 0.51
TRIM47-204ENST00000587339 RHNO1Q9BSD3 238 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 CCNB1IP1Q9NPC3 277 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 EXOSC3Q9NQT5 275 aaKnown RBP18.21■□□□□ 0.51
TRIM47-204ENST00000587339 C20orf141Q9NUB4 165 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 PLCXD1Q9NUJ7 323 aa18.21■□□□□ 0.51
TRIM47-204ENST00000587339 CDC42EP2O14613 210 aa18.2■□□□□ 0.5
TRIM47-204ENST00000587339 CSO75390 466 aaKnown RBP18.2■□□□□ 0.5
TRIM47-204ENST00000587339 NGFRP08138 427 aa18.2■□□□□ 0.5
TRIM47-204ENST00000587339 IFI30P13284 250 aa18.2■□□□□ 0.5
TRIM47-204ENST00000587339 RBM34P42696 430 aaKnown RBP18.2■□□□□ 0.5
TRIM47-204ENST00000587339 CCR4P51679 360 aa18.2■□□□□ 0.5
TRIM47-204ENST00000587339 PRKCDQ05655 676 aa18.2■□□□□ 0.5
TRIM47-204ENST00000587339 SLC27A4Q6P1M0 643 aa18.2■□□□□ 0.5
TRIM47-204ENST00000587339 C16orf47Q6ZP98 133 aaPredicted RBP18.2■□□□□ 0.5
TRIM47-204ENST00000587339 TMCO5AQ8N6Q1 288 aa18.2■□□□□ 0.5
TRIM47-204ENST00000587339 OR5L2Q8NGL0 311 aa18.2■□□□□ 0.5
TRIM47-204ENST00000587339 DNAJA4Q8WW22 397 aaPredicted RBP18.2■□□□□ 0.5
TRIM47-204ENST00000587339 IPCEF1Q8WWN9 437 aaPredicted RBP18.2■□□□□ 0.5
TRIM47-204ENST00000587339 TAAR9Q96RI9 348 aa18.2■□□□□ 0.5
TRIM47-204ENST00000587339 IL4I1Q96RQ9 567 aa18.2■□□□□ 0.5
TRIM47-204ENST00000587339 ZNF426Q9BUY5 554 aa18.2■□□□□ 0.5
TRIM47-204ENST00000587339 TBL1XR1Q9BZK7 514 aa18.2■□□□□ 0.5
TRIM47-204ENST00000587339 ZBTB20Q9HC78 741 aaPredicted RBP18.2■□□□□ 0.5
TRIM47-204ENST00000587339 AMBNQ9NP70 447 aa18.2■□□□□ 0.5
TRIM47-204ENST00000587339 IL20Q9NYY1 176 aa18.2■□□□□ 0.5
TRIM47-204ENST00000587339 NCDNQ9UBB6 729 aa18.2■□□□□ 0.5
TRIM47-204ENST00000587339 NPFFR2Q9Y5X5 522 aa18.2■□□□□ 0.5
TRIM47-204ENST00000587339 KIF26BQ2KJY2 2108 aa18.2■□□□□ 0.5
TRIM47-204ENST00000587339 LOC102723996A0A087X1L8 192 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 A0A1W2PQD3 144 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 CCDC160A6NGH7 325 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 OR6C70A6NIJ9 312 aa18.19■□□□□ 0.5
TRIM47-204ENST00000587339 UMODP07911 640 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms