RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 FIS1Q9Y3D6 152 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 MAGED1Q9Y5V3 778 aaPredicted RBP10.34□□□□□ -0.75
LIG3-207ENST00000586119 KCNE3Q9Y6H6 103 aa10.34□□□□□ -0.75
LIG3-207ENST00000586119 HEATR1Q9H583 2144 aaKnown RBP10.33□□□□□ -0.76
LIG3-207ENST00000586119 A0A087WZY1 265 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 IGHV3-15A0A0B4J1V0 119 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 ZNF814B7Z6K7 855 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 PDPK1O15530 556 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 RAMP1O60894 148 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 RSL1D1O76021 490 aaKnown RBP10.33□□□□□ -0.76
LIG3-207ENST00000586119 CD8AP01732 235 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 BPGMP07738 259 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 SDC1P18827 310 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 ENPP1P22413 925 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 SERPINB4P48594 390 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 ZNF41P51814 821 aaPredicted RBP10.33□□□□□ -0.76
LIG3-207ENST00000586119 MANFP55145 182 aaKnown RBP10.33□□□□□ -0.76
LIG3-207ENST00000586119 FAPQ12884 760 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 PCLAFQ15004 111 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 ZNF239Q16600 458 aaKnown RBP10.33□□□□□ -0.76
LIG3-207ENST00000586119 PGGHGQ32M88 737 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 TMEM176BQ3YBM2 270 aaPredicted RBP10.33□□□□□ -0.76
LIG3-207ENST00000586119 EXOSC6Q5RKV6 272 aaKnown RBP10.33□□□□□ -0.76
LIG3-207ENST00000586119 SFRP5Q5T4F7 317 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 SEZ6L2Q6UXD5 910 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 FRMD7Q6ZUT3 714 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 CDRT4Q8N9R6 151 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 KBTBD8Q8NFY9 601 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 B4GALNT2Q8NHY0 566 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 FBXO27Q8NI29 283 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 FAM76AQ8TAV0 307 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 ZBTB8AQ96BR9 441 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 KLHL15Q96M94 604 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 TRMOQ9BU70 441 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 REEP4Q9H6H4 257 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 LRTM1Q9HBL6 345 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 GIMAP2Q9UG22 337 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 PRSS50Q9UI38 385 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 ING1Q9UK53 422 aaPredicted RBP10.33□□□□□ -0.76
LIG3-207ENST00000586119 LIPT1Q9Y234 373 aa10.33□□□□□ -0.76
LIG3-207ENST00000586119 A0A1W2PNR3 127 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 C7orf72A4D263 438 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 ZNF195O14628 629 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 GPRIN2O60269 458 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 NPHS1O60500 1241 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 ADAM11O75078 769 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 CRCPO75575 148 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 SNUPNO95149 360 aaKnown RBP10.32□□□□□ -0.76
LIG3-207ENST00000586119 IGHV4-39P01824 125 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 NGFRP08138 427 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 ALOX5P09917 674 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 LINC00032P0C843 101 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 ALDH3A1P30838 453 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 FRKP42685 505 aaPredicted RBP10.32□□□□□ -0.76
LIG3-207ENST00000586119 ZNF117Q03924 483 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 MPP2Q14168 576 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 CFAP157Q5JU67 520 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.32□□□□□ -0.76
LIG3-207ENST00000586119 HHATQ5VTY9 493 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 HEPHL1Q6MZM0 1159 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 HMBOX1Q6NT76 420 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 ADAM5Q6NVV9 412 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 IKBIPQ70UQ0 350 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 STK32CQ86UX6 486 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 NUDCD3Q8IVD9 361 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 C10orf107Q8IVU9 208 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 STEAP2Q8NFT2 490 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 CEP70Q8NHQ1 597 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 PHOSPHO1Q8TCT1 267 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 ACTRT2Q8TDY3 377 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 RNF128Q8TEB7 428 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 SMAP2Q8WU79 429 aaPredicted RBP10.32□□□□□ -0.76
LIG3-207ENST00000586119 CDS1Q92903 461 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 PPCDCQ96CD2 204 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 SLCO5A1Q9H2Y9 848 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 COQ10BQ9H8M1 238 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 YAE1D1Q9NRH1 226 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 GLRX2Q9NS18 164 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 SIRT3Q9NTG7 399 aaPredicted RBP10.32□□□□□ -0.76
LIG3-207ENST00000586119 C1orf109Q9NX04 203 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 PAQR5Q9NXK6 330 aaPredicted RBP10.32□□□□□ -0.76
LIG3-207ENST00000586119 NTMQ9P121 344 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 STOML1Q9UBI4 398 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 CARD8Q9Y2G2 431 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 WBP11Q9Y2W2 641 aaKnown RBP10.32□□□□□ -0.76
LIG3-207ENST00000586119 RNF115Q9Y4L5 304 aa10.32□□□□□ -0.76
LIG3-207ENST00000586119 TTC36A6NLP5 189 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 SCDO00767 359 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 CD3EP07766 207 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 UROSP10746 265 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 PRPH2P23942 346 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 IDUAP35475 653 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 BSPH1Q075Z2 132 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 DMTNQ08495 405 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 PDE7AQ13946 482 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 LASP1Q14847 261 aaKnown RBP10.31□□□□□ -0.76
LIG3-207ENST00000586119 ZNF672Q499Z4 452 aaPredicted RBP10.31□□□□□ -0.76
LIG3-207ENST00000586119 TMEM201Q5SNT2 666 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 FCRLAQ7L513 359 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 OLIG3Q7RTU3 272 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms