RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 ESRP2Q9H6T0 727 aaKnown RBP13.37□□□□□ -0.27
VAPA-209ENST00000585042 EML4Q9HC35 981 aaKnown RBP13.37□□□□□ -0.27
VAPA-209ENST00000585042 SIRT3Q9NTG7 399 aaPredicted RBP13.37□□□□□ -0.27
VAPA-209ENST00000585042 ZCCHC3Q9NUD5 404 aaKnown RBP13.37□□□□□ -0.27
VAPA-209ENST00000585042 KLHL13Q9P2N7 655 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 ICAM5Q9UMF0 924 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 PTGDR2Q9Y5Y4 395 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 CSPG4Q6UVK1 2322 aa13.37□□□□□ -0.27
VAPA-209ENST00000585042 EFNA2O43921 213 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 LYPLA1O75608 230 aaPredicted RBP13.36□□□□□ -0.27
VAPA-209ENST00000585042 PCSK6P29122 969 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 HPCAL1P37235 193 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 CCT3P49368 545 aaKnown RBP13.36□□□□□ -0.27
VAPA-209ENST00000585042 ATP12AP54707 1039 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 RPS4XP62701 263 aaKnown RBP13.36□□□□□ -0.27
VAPA-209ENST00000585042 RPL38P63173 70 aaKnown RBP13.36□□□□□ -0.27
VAPA-209ENST00000585042 ZNF117Q03924 483 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 CAPRIN1Q14444 709 aaKnown RBP13.36□□□□□ -0.27
VAPA-209ENST00000585042 LSM12Q3MHD2 195 aaKnown RBP13.36□□□□□ -0.27
VAPA-209ENST00000585042 UGT3A2Q3SY77 523 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 SLC25A53Q5H9E4 307 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 NCMAPQ5T1S8 102 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 TFAP2EQ6VUC0 442 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 C10orf107Q8IVU9 208 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 OR56A1Q8NGH5 318 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 PHOSPHO1Q8TCT1 267 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 GPR119Q8TDV5 335 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 ADAMTS15Q8TE58 950 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 ROBO4Q8WZ75 1007 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 OR5P2Q8WZ92 322 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 JADE3Q92613 823 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 ARL8AQ96BM9 186 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 S100PBPQ96BU1 408 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 MOAP1Q96BY2 351 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 MRGPRX4Q96LA9 322 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 PPP3R2Q96LZ3 170 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 PRPF18Q99633 342 aaKnown RBP13.36□□□□□ -0.27
VAPA-209ENST00000585042 TMEM109Q9BVC6 243 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 C12orf49Q9H741 205 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 TMEM185BQ9H7F4 350 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 ATAD3AQ9NVI7 634 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 LGALS13Q9UHV8 139 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 FAF1Q9UNN5 650 aaPredicted RBP13.36□□□□□ -0.27
VAPA-209ENST00000585042 TRAF6Q9Y4K3 522 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 RNF115Q9Y4L5 304 aa13.36□□□□□ -0.27
VAPA-209ENST00000585042 INAFM1C9JVW0 142 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 GTPBP1O00178 669 aaKnown RBP13.35□□□□□ -0.27
VAPA-209ENST00000585042 ETV2O00321 342 aaPredicted RBP13.35□□□□□ -0.27
VAPA-209ENST00000585042 SCAMP2O15127 329 aaKnown RBP13.35□□□□□ -0.27
VAPA-209ENST00000585042 NPHS1O60500 1241 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 EIF4E2O60573 245 aaKnown RBP13.35□□□□□ -0.27
VAPA-209ENST00000585042 NTN1O95631 604 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 CD3EP07766 207 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 IL32P24001 234 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 SFTPDP35247 375 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 IDUAP35475 653 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 RAC3P60763 192 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 ITGADQ13349 1161 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 LASP1Q14847 261 aaKnown RBP13.35□□□□□ -0.27
VAPA-209ENST00000585042 PCLAFQ15004 111 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 KRT71Q3SY84 523 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 TMEM176BQ3YBM2 270 aaPredicted RBP13.35□□□□□ -0.27
VAPA-209ENST00000585042 GALNTL6Q49A17 601 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 CCNJQ5T5M9 372 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 FCRLAQ7L513 359 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 TUSC5Q8IXB3 177 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 C4orf33Q8N1A6 199 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 LILRB1Q8NHL6 650 aaPredicted RBP13.35□□□□□ -0.27
VAPA-209ENST00000585042 CLHC1Q8NHS4 586 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 FBXO27Q8NI29 283 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 FBXO30Q8TB52 745 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 ABHD3Q8WU67 409 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 CDS1Q92903 461 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 FBXW5Q969U6 566 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 COQ8BQ96D53 544 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 GRIP2Q9C0E4 1043 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 BCO1Q9HAY6 547 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 MKS1Q9NXB0 559 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 LAMP3Q9UQV4 416 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 DTNAQ9Y4J8 743 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 USF3Q68DE3 2245 aa13.35□□□□□ -0.27
VAPA-209ENST00000585042 KIAA1324LA8MWY0 1029 aaPredicted RBP13.34□□□□□ -0.27
VAPA-209ENST00000585042 NPIPB9F8W1W9 429 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 NUDT14O95848 222 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 DANCRP0C864 163 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 ZNF844Q08AG5 666 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 FOXF1Q12946 379 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 SELENBP1Q13228 472 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 TNK1Q13470 666 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 DCST2Q5T1A1 773 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 BHLHB9Q6PI77 547 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 CBLN3Q6UW01 205 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 Q6ZT83 130 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 NUFIP2Q7Z417 695 aaKnown RBP13.34□□□□□ -0.27
VAPA-209ENST00000585042 DDIASQ8IXT1 998 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 TOR1AIP2Q8NFQ8 470 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 SPATA3Q8NHX4 192 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 PIWIL2Q8TC59 973 aaKnown RBP13.34□□□□□ -0.27
VAPA-209ENST00000585042 SFXN5Q8TD22 340 aa13.34□□□□□ -0.27
VAPA-209ENST00000585042 ZFP90Q8TF47 636 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms