RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 ESPNLQ6ZVH7 1005 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 GALNT10Q86SR1 603 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 OR2T11Q8NH01 316 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 OR2V1Q8NHB1 315 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.09□□□□□ -0.47
SS18-222ENST00000582792 PIWIL2Q8TC59 973 aaKnown RBP12.09□□□□□ -0.47
SS18-222ENST00000582792 AGR3Q8TD06 166 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 SMAP2Q8WU79 429 aaPredicted RBP12.09□□□□□ -0.47
SS18-222ENST00000582792 GTPBP3Q969Y2 492 aaKnown RBP12.09□□□□□ -0.47
SS18-222ENST00000582792 S100PBPQ96BU1 408 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 ELP4Q96EB1 424 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 NPAS1Q99742 590 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 HDHD5Q9BXW7 423 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 SLCO5A1Q9H2Y9 848 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 C12orf49Q9H741 205 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 C3orf14Q9HBI5 128 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 HHATLQ9HCP6 504 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 MIEF1Q9NQG6 463 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 PNPOQ9NVS9 261 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 ASIC5Q9NY37 505 aa12.09□□□□□ -0.47
SS18-222ENST00000582792 MAGED1Q9Y5V3 778 aaPredicted RBP12.09□□□□□ -0.47
SS18-222ENST00000582792 GXYLT2A0PJZ3 443 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 TTC36A6NLP5 189 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 ALG1L2C9J202 215 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 TNFSF11O14788 317 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 CLOCKO15516 846 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 SEC22BO75396 215 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 GCM2O75603 506 aaPredicted RBP12.08□□□□□ -0.48
SS18-222ENST00000582792 TGDSO95455 350 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 OPN1LWP04000 364 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 CD3EP07766 207 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 IFI6P09912 130 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 PSMA4P25789 261 aaKnown RBP12.08□□□□□ -0.48
SS18-222ENST00000582792 NTSP30990 170 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 CDKN1AP38936 164 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 ATP6AP1LQ52LC2 224 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 HBMQ6B0K9 141 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 GTF2IRD2BQ6EKJ0 949 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 FAM71E1Q6IPT2 247 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 DNAJC14Q6Y2X3 702 aaPredicted RBP12.08□□□□□ -0.48
SS18-222ENST00000582792 DNM1P46Q6ZS02 220 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 IKBIPQ70UQ0 350 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 GTF2IRD2Q86UP8 949 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 GABRG1Q8N1C3 465 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 CDC26Q8NHZ8 85 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 STON2Q8WXE9 905 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 TMEM158Q8WZ71 300 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 SLC9A6Q92581 669 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 ZBTB8AQ96BR9 441 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 ZNF764Q96H86 408 aaPredicted RBP12.08□□□□□ -0.48
SS18-222ENST00000582792 C3orf30Q96M34 536 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 RNF145Q96MT1 663 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 AMDHD1Q96NU7 426 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 CCDC134Q9H6E4 229 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 ESRP2Q9H6T0 727 aaKnown RBP12.08□□□□□ -0.48
SS18-222ENST00000582792 MYNNQ9NPC7 610 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 NGBQ9NPG2 151 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 YAE1D1Q9NRH1 226 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 LIPT1Q9Y234 373 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 SNX8Q9Y5X2 465 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 PTGDR2Q9Y5Y4 395 aa12.08□□□□□ -0.48
SS18-222ENST00000582792 A0A0J9YW62 118 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 A0A1W2PP18 115 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 A0A1W2PRB8 838 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 NDUFB5O43674 189 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 TBX19O60806 448 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 SKAP2O75563 359 aaPredicted RBP12.07□□□□□ -0.48
SS18-222ENST00000582792 OXSR1O95747 527 aaPredicted RBP12.07□□□□□ -0.48
SS18-222ENST00000582792 IGHV4-39P01824 125 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 NGFRP08138 427 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 PRPS2P11908 318 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 ME2P23368 584 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 ASMTP46597 345 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 EMX2Q04743 252 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 TAB1Q15750 504 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 PDCD2Q16342 344 aaPredicted RBP12.07□□□□□ -0.48
SS18-222ENST00000582792 PLPPR5Q32ZL2 321 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 ZNF672Q499Z4 452 aaPredicted RBP12.07□□□□□ -0.48
SS18-222ENST00000582792 RFTN2Q52LD8 501 aaPredicted RBP12.07□□□□□ -0.48
SS18-222ENST00000582792 C6orf136Q5SQH8 315 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 PDSS1Q5T2R2 415 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 CPTPQ5TA50 214 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 FIGNL1Q6PIW4 674 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 TFAP2EQ6VUC0 442 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 OR4C3Q8NH37 302 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 ACTRT2Q8TDY3 377 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 HSD17B8Q92506 261 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 PIK3R3Q92569 461 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 HOXB13Q92826 284 aaPredicted RBP12.07□□□□□ -0.48
SS18-222ENST00000582792 OSTF1Q92882 214 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 NEUROG1Q92886 237 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 TUBGCP3Q96CW5 907 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 ZBED6CLQ96FA7 236 aaPredicted RBP12.07□□□□□ -0.48
SS18-222ENST00000582792 MAELQ96JY0 434 aaKnown RBP12.07□□□□□ -0.48
SS18-222ENST00000582792 MED17Q9NVC6 651 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 FBXO34Q9NWN3 711 aa12.07□□□□□ -0.48
SS18-222ENST00000582792 ADAM11O75078 769 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 NKX2-2O95096 273 aa12.06□□□□□ -0.48
SS18-222ENST00000582792 PABPC4LP0CB38 370 aaKnown RBP12.06□□□□□ -0.48
SS18-222ENST00000582792 DDX5P17844 614 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms