RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 LRFN3Q9BTN0 628 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 HOXD1Q9GZZ0 328 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 ZNF768Q9H5H4 540 aaKnown RBP20.91■□□□□ 0.94
CCDC47-204ENST00000582252 DNAJB12Q9NXW2 375 aaKnown RBP20.91■□□□□ 0.94
CCDC47-204ENST00000582252 DTX4Q9Y2E6 619 aa20.91■□□□□ 0.94
CCDC47-204ENST00000582252 LY6G6EA0A0G2JKS1 128 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 POLR1CO15160 346 aaPredicted RBP20.9■□□□□ 0.94
CCDC47-204ENST00000582252 RCBTB2O95199 551 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 LYPD3O95274 346 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 IFI30P13284 250 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 MYF5P13349 255 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 BMP7P18075 431 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 MYL12AP19105 171 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 CLEC12AQ5QGZ9 265 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 ZNF440Q8IYI8 595 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 BCORP1Q8N888 145 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 LSMEM1Q8N8F7 131 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 SUMF1Q8NBK3 374 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 ANKK1Q8NFD2 765 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 FANK1Q8TC84 345 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 VMP1Q96GC9 406 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 SLC46A1Q96NT5 459 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 ZNF304Q9HCX3 659 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 TAS2R16Q9NYV7 291 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 RPS6KB2Q9UBS0 482 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 MRTO4Q9UKD2 239 aaKnown RBP20.9■□□□□ 0.94
CCDC47-204ENST00000582252 U3KQA8 63 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 A0A0B4J2E0 115 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 A0A1B0GX12 115 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 NPIPB9F8W1W9 429 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 SURF4O15260 269 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 NADKO95544 446 aaPredicted RBP20.9■□□□□ 0.94
CCDC47-204ENST00000582252 INHBBP09529 407 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 GCGRP47871 477 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 OR1D4P47884 311 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 CTBP2P56545 445 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 TMPRSS11FQ6ZWK6 438 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 NANOGP1Q8N7R0 232 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 OR52I1Q8NGK6 324 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 OR9Q1Q8NGQ5 310 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 S100ZQ8WXG8 99 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 ART5Q96L15 291 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 OR5M11Q96RB7 305 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 PALMDQ9NP74 551 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 PNO1Q9NRX1 252 aaKnown RBP20.9■□□□□ 0.94
CCDC47-204ENST00000582252 SIDT1Q9NXL6 827 aaKnown RBP20.9■□□□□ 0.94
CCDC47-204ENST00000582252 SLC35A3Q9Y2D2 325 aa20.9■□□□□ 0.94
CCDC47-204ENST00000582252 EFCAB7A8K855 629 aa20.89■□□□□ 0.93
CCDC47-204ENST00000582252 NTN1O95631 604 aa20.89■□□□□ 0.93
CCDC47-204ENST00000582252 ZNF806P0C7X5 589 aa20.89■□□□□ 0.93
CCDC47-204ENST00000582252 GRK5P34947 590 aa20.89■□□□□ 0.93
CCDC47-204ENST00000582252 RORAP35398 523 aa20.89■□□□□ 0.93
CCDC47-204ENST00000582252 TCF15Q12870 199 aa20.89■□□□□ 0.93
CCDC47-204ENST00000582252 SPHARQ15513 63 aa20.89■□□□□ 0.93
CCDC47-204ENST00000582252 C3orf38Q5JPI3 329 aa20.89■□□□□ 0.93
CCDC47-204ENST00000582252 SLC30A6Q6NXT4 461 aa20.89■□□□□ 0.93
CCDC47-204ENST00000582252 GUSBP11Q6P575 273 aa20.89■□□□□ 0.93
CCDC47-204ENST00000582252 BCDIN3DQ7Z5W3 292 aaKnown RBP20.89■□□□□ 0.93
CCDC47-204ENST00000582252 SLITRK4Q8IW52 837 aa20.89■□□□□ 0.93
CCDC47-204ENST00000582252 TMEM151BQ8IW70 566 aa20.89■□□□□ 0.93
CCDC47-204ENST00000582252 SLC43A2Q8N370 569 aa20.89■□□□□ 0.93
CCDC47-204ENST00000582252 ZNF527Q8NB42 609 aa20.89■□□□□ 0.93
CCDC47-204ENST00000582252 OR4Q3Q8NH05 313 aa20.89■□□□□ 0.93
CCDC47-204ENST00000582252 RPL3LQ92901 407 aaKnown RBP20.89■□□□□ 0.93
CCDC47-204ENST00000582252 SENP5Q96HI0 755 aaPredicted RBP20.89■□□□□ 0.93
CCDC47-204ENST00000582252 DPH1Q9BZG8 443 aa20.89■□□□□ 0.93
CCDC47-204ENST00000582252 DCSTAMPQ9H295 470 aa20.89■□□□□ 0.93
CCDC47-204ENST00000582252 FGF20Q9NP95 211 aaPredicted RBP20.89■□□□□ 0.93
CCDC47-204ENST00000582252 A0A1B0GX78 115 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 CPED1A4D0V7 1026 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 OR2W5A6NFC9 320 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 A8MU76 341 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 FOXD2O60548 495 aaPredicted RBP20.88■□□□□ 0.93
CCDC47-204ENST00000582252 SCG5P05408 212 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 FOLR1P15328 257 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 GRK6P43250 576 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 MTNR1AP48039 350 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 ELAVL1Q15717 326 aaKnown RBP20.88■□□□□ 0.93
CCDC47-204ENST00000582252 TSTQ16762 297 aaKnown RBP20.88■□□□□ 0.93
CCDC47-204ENST00000582252 TMEM71Q6P5X7 295 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 WDR88Q6ZMY6 472 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 PRSS33Q8NF86 280 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 PFN4Q8NHR9 129 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 BPIFA2Q96DR5 249 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 RNFT2Q96EX2 444 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 SAMD8Q96LT4 415 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 WDR12Q9GZL7 423 aaKnown RBP20.88■□□□□ 0.93
CCDC47-204ENST00000582252 OR52D1Q9H346 318 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 HMG20AQ9NP66 347 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 H2AFY2Q9P0M6 372 aaPredicted RBP20.88■□□□□ 0.93
CCDC47-204ENST00000582252 DHCR7Q9UBM7 475 aaKnown RBP20.88■□□□□ 0.93
CCDC47-204ENST00000582252 SRPK3Q9UPE1 567 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 LSM2Q9Y333 95 aaKnown RBP20.88■□□□□ 0.93
CCDC47-204ENST00000582252 EXOSC1Q9Y3B2 195 aaKnown RBP20.88■□□□□ 0.93
CCDC47-204ENST00000582252 PCDHGA3Q9Y5H0 932 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 CLCA3PQ9Y6N3 262 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 SPTBP11277 2137 aa20.88■□□□□ 0.93
CCDC47-204ENST00000582252 COL5A1P20908 1838 aaPredicted RBP20.88■□□□□ 0.93
CCDC47-204ENST00000582252 A0A1B0GWA3 101 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 SERINC4A6NH21 518 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms