RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ADH6P28332 368 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 SRD5A2P31213 254 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 DNASE1L1P49184 302 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 MEOX1P50221 254 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 DSCR4P56555 118 aaPredicted RBP9.47□□□□□ -0.89
CCDC47-203ENST00000580986 ZNF117Q03924 483 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 CBFBQ13951 182 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 NRF1Q16656 503 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 LRRC23Q53EV4 343 aaPredicted RBP9.47□□□□□ -0.89
CCDC47-203ENST00000580986 CYBRD1Q53TN4 286 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 SLC25A53Q5H9E4 307 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 OLIG3Q7RTU3 272 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 DHFR2Q86XF0 187 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 ZNF614Q8N883 585 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 LSMEM1Q8N8F7 131 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 TEX19Q8NA77 164 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 Q8NA96 180 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 OR2M3Q8NG83 312 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 GPR32P1Q8NGA4 272 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 OR5W2Q8NH69 310 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 B4GALNT2Q8NHY0 566 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 DUSP19Q8WTR2 217 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 FAM162AQ96A26 154 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 CLPTM1LQ96KA5 538 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 RAB3IPQ96QF0 476 aaPredicted RBP9.47□□□□□ -0.89
CCDC47-203ENST00000580986 BARD1Q99728 777 aaKnown RBP9.47□□□□□ -0.89
CCDC47-203ENST00000580986 ARHGDIGQ99819 225 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 RSPO3Q9BXY4 272 aaPredicted RBP9.47□□□□□ -0.89
CCDC47-203ENST00000580986 TTTY12Q9BZ98 90 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 ACKR4Q9NPB9 350 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 ZNF71Q9NQZ8 489 aaPredicted RBP9.47□□□□□ -0.89
CCDC47-203ENST00000580986 KLHL1Q9NR64 748 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 TUBA8Q9NY65 449 aaPredicted RBP9.47□□□□□ -0.89
CCDC47-203ENST00000580986 TESQ9UGI8 421 aaKnown RBP9.47□□□□□ -0.89
CCDC47-203ENST00000580986 POMPQ9Y244 141 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 SLC9A8Q9Y2E8 581 aa9.47□□□□□ -0.89
CCDC47-203ENST00000580986 PIEZO2Q9H5I5 2752 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 A0A0G2JMM0 328 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 A0A1W2PPB8 328 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 A0A1W2PRS3 328 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 CFAP73A6NFT4 308 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 CLDN24A6NM45 220 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 KIR3DP1A8MWS1 328 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 B4DXG7 233 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 LINC01387J3KSC0 135 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 GPR37O15354 613 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 EPPINO95925 133 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 SERPINA1P01009 418 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 HPNP05981 417 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 UBTFL6P0CB48 400 aaPredicted RBP9.46□□□□□ -0.9
CCDC47-203ENST00000580986 UMPSP11172 480 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 ZNF17P17021 662 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 PGCP20142 388 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 ST13P50502 369 aaKnown RBP9.46□□□□□ -0.9
CCDC47-203ENST00000580986 MAP2K6P52564 334 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 GPR85P60893 370 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 MS4A2Q01362 244 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 EPS8Q12929 822 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 FLOT2Q14254 428 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 PLEKHN1Q494U1 663 aaPredicted RBP9.46□□□□□ -0.9
CCDC47-203ENST00000580986 NADK2Q4G0N4 442 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 ZNF324BQ6AW86 544 aaPredicted RBP9.46□□□□□ -0.9
CCDC47-203ENST00000580986 CBLN3Q6UW01 205 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.46□□□□□ -0.9
CCDC47-203ENST00000580986 CLIP4Q8N3C7 705 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 FAM109AQ8N4B1 249 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 OR4K17Q8NGC6 315 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 GEMIN6Q8WXD5 167 aaKnown RBP9.46□□□□□ -0.9
CCDC47-203ENST00000580986 TMEM234Q8WY98 164 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 ST8SIA1Q92185 356 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 CNOT9Q92600 299 aaKnown RBP9.46□□□□□ -0.9
CCDC47-203ENST00000580986 PROX1Q92786 737 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 UTP4Q969X6 686 aaKnown RBP9.46□□□□□ -0.9
CCDC47-203ENST00000580986 ZBTB8AQ96BR9 441 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 CCDC124Q96CT7 223 aaKnown RBP9.46□□□□□ -0.9
CCDC47-203ENST00000580986 C1GALT1C1Q96EU7 318 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 OR2B2Q9GZK3 357 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 MAGIXQ9H6Y5 334 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 C12orf10Q9HB07 376 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 SLC13A4Q9UKG4 626 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 PACSIN3Q9UKS6 424 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 CARD8Q9Y2G2 431 aa9.46□□□□□ -0.9
CCDC47-203ENST00000580986 TCRBV5S2A0A599 114 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 PINLYPA6NC86 204 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 WIPF1O43516 503 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 SUSD5O60279 629 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 TPST1O60507 370 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 NTN1O95631 604 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 IGHG3P01860 377 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 OPN1SWP03999 348 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 SEMG1P04279 462 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 GPIP06744 558 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 LINGO3P0C6S8 592 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 NCK1P16333 377 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 ZNF24P17028 368 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 ATP6V1B2P21281 511 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 FKBP2P26885 142 aaKnown RBP9.45□□□□□ -0.9
CCDC47-203ENST00000580986 ELK4P28324 431 aa9.45□□□□□ -0.9
CCDC47-203ENST00000580986 EIF1P41567 113 aaKnown RBP9.45□□□□□ -0.9
CCDC47-203ENST00000580986 ACAA2P42765 397 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms