RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, human

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMP22-208	ENST00000580584	CDKN2C	P42773	168 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	KHK	P50053	298 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	CCR4	P51679	360 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	SUMO3	P55854	103 aa	Predicted RBP	13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	RAC1	P63000	192 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	EEF1A1	P68104	462 aa	Known RBP	13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	ARHGAP11B	Q3KRB8	267 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	EEF1A1P5	Q5VTE0	462 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	HBM	Q6B0K9	141 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	HEPHL1	Q6MZM0	1159 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	HMGN2P46	Q86SG4	172 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	LILRA2	Q8N149	483 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	OR2V1	Q8NHB1	315 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	FBXO27	Q8NI29	283 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	XAGE5	Q8WWM1	108 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	NEURL3	Q96EH8	262 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	KLHL15	Q96M94	604 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	PANX1	Q96RD7	426 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	PRRG4	Q9BZD6	226 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	NMUR2	Q9GZQ4	415 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	LIME1	Q9H400	295 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	EXD2	Q9NVH0	621 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	STOML1	Q9UBI4	398 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	BTNL2	Q9UIR0	455 aa		13.92	□□□□□ -0.18
PMP22-208	ENST00000580584	ANKRD17	O75179	2603 aa	Known RBP	13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	FAM221A	A4D161	298 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	SH3D21	A4FU49	640 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	SERINC4	A6NH21	518 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	ADAMDEC1	O15204	470 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	ZNF264	O43296	627 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	EFNA2	O43921	213 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	KIAA0513	O60268	411 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	UGT2B17	O75795	530 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	CYP7B1	O75881	506 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	GSN	P06396	782 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	EPX	P11678	715 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	DNAJA1	P31689	397 aa	Known RBP	13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	EIF1	P41567	113 aa	Known RBP	13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	FAM27E3	Q08E93	113 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	GUSBP1	Q15486	140 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	ZNF141	Q15928	474 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	MAPK14	Q16539	360 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	ATAD3B	Q5T9A4	648 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	AGBL2	Q5U5Z8	902 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	FBXW10	Q5XX13	1052 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	ESPNL	Q6ZVH7	1005 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	OR5W2	Q8NH69	310 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	PNPT1	Q8TCS8	783 aa	Known RBP	13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	GPR119	Q8TDV5	335 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	ZNF75CP	Q92670	426 aa	Predicted RBP	13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	MAEL	Q96JY0	434 aa	Known RBP	13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	OR52B2	Q96RD2	323 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	OR52E6	Q96RD3	313 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	ZBTB18	Q99592	522 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	DOCK7	Q96N67	2140 aa		13.91	□□□□□ -0.18
PMP22-208	ENST00000580584	CCDC168	Q8NDH2	2452 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	PRAMEF27	A3QJZ7	478 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	CCDC154	A6NI56	674 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	ZNF195	O14628	629 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	KLF11	O14901	512 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	BCAS1	O75363	584 aa	Predicted RBP	13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	SYNGR4	O95473	234 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	PLG	P00747	810 aa	Predicted RBP	13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	CGA	P01215	116 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	UBTFL6	P0CB48	400 aa	Predicted RBP	13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	IDO1	P14902	403 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	PRKCA	P17252	672 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	ELK4	P28324	431 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	CCKAR	P32238	428 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	SKP2	Q13309	424 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	DAZAP2	Q15038	168 aa	Predicted RBP	13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	QPRT	Q15274	297 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	POU4F3	Q15319	338 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	TESK1	Q15569	626 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	TTMP	Q5BVD1	217 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	TYW3	Q6IPR3	259 aa	Known RBP	13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	FAM214B	Q7L5A3	538 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	RNF130	Q86XS8	419 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	CDC20B	Q86Y33	519 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	ZNF610	Q8N9Z0	462 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	ATP6V1C2	Q8NEY4	427 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	TOR1AIP2	Q8NFQ8	470 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	PIWIL2	Q8TC59	973 aa	Known RBP	13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	ROPN1L	Q96C74	230 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	SRXN1	Q9BYN0	137 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	MCTS1	Q9ULC4	181 aa	Known RBP	13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	WDR45	Q9Y484	360 aa		13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	GPC6	Q9Y625	555 aa	Predicted RBP	13.9	□□□□□ -0.18
PMP22-208	ENST00000580584	HMGN4	O00479	90 aa		13.89	□□□□□ -0.19
PMP22-208	ENST00000580584	EIF4E2	O60573	245 aa	Known RBP	13.89	□□□□□ -0.19
PMP22-208	ENST00000580584	DIAPH2	O60879	1101 aa		13.89	□□□□□ -0.19
PMP22-208	ENST00000580584	SLC22A3	O75751	556 aa		13.89	□□□□□ -0.19
PMP22-208	ENST00000580584	NTN1	O95631	604 aa		13.89	□□□□□ -0.19
PMP22-208	ENST00000580584	AGR2	O95994	175 aa		13.89	□□□□□ -0.19
PMP22-208	ENST00000580584	CSTA	P01040	98 aa		13.89	□□□□□ -0.19
PMP22-208	ENST00000580584	KCNJ5	P48544	419 aa		13.89	□□□□□ -0.19
PMP22-208	ENST00000580584	CBFB	Q13951	182 aa		13.89	□□□□□ -0.19
PMP22-208	ENST00000580584	PDCD4	Q53EL6	469 aa	Known RBP	13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms