RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 TGFBR3LH3BV60 316 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 GNB5O14775 395 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 PRKNO60260 465 aaPredicted RBP16.25■□□□□ 0.19
ERBB2-205ENST00000578199 IGKV1D-16P01601 117 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 IGHA1P01876 353 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 MRPL3P09001 348 aaKnown RBP16.25■□□□□ 0.19
ERBB2-205ENST00000578199 BMP7P18075 431 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 PSG6Q00889 435 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 CCINQ13939 588 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 GLYR1Q49A26 553 aaPredicted RBP16.25■□□□□ 0.19
ERBB2-205ENST00000578199 GATAD2AQ86YP4 633 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 VWA5B2Q8N398 1253 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 C17orf50Q8WW18 174 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 PTP4A1Q93096 173 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 ABHD8Q96I13 439 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 STACQ99469 402 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 IFT27Q9BW83 186 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 OR51V1Q9H2C8 321 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 SIAEQ9HAT2 523 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 MED17Q9NVC6 651 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 FLRT3Q9NZU0 649 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 GSTK1Q9Y2Q3 226 aa16.25■□□□□ 0.19
ERBB2-205ENST00000578199 RBMX2Q9Y388 322 aaKnown RBP16.25■□□□□ 0.19
ERBB2-205ENST00000578199 SPTY2D1-AS1A0A0U1RR47 76 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 SLC35F4A4IF30 521 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 OR5K3A6NET4 321 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 GABRPO00591 440 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 HRO43593 1189 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 HMGN1P05114 100 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 NOS3P29474 1203 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 ARMC4Q5T2S8 1044 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 CD200R1LQ6Q8B3 271 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 ZNF322Q6U7Q0 402 aaPredicted RBP16.24■□□□□ 0.19
ERBB2-205ENST00000578199 MARCH9Q86YJ5 346 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 ARIH2OSQ8N7S6 290 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 CYB561A3Q8NBI2 242 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 ISYNA1Q9NPH2 558 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 KRCC1Q9NPI7 259 aaPredicted RBP16.24■□□□□ 0.19
ERBB2-205ENST00000578199 SLC9B1P1A6NJY1 282 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 TMCC2O75069 709 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 GYPBP06028 91 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 CASP3P42574 277 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 MAZP56270 477 aaKnown RBP16.24■□□□□ 0.19
ERBB2-205ENST00000578199 FAM53BQ14153 422 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 KCNJ8Q15842 424 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 METTL27Q8N6F8 245 aaPredicted RBP16.24■□□□□ 0.19
ERBB2-205ENST00000578199 TOR1AIP2Q8NFQ8 470 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 OR52L1Q8NGH7 329 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 BRIX1Q8TDN6 353 aaKnown RBP16.24■□□□□ 0.19
ERBB2-205ENST00000578199 PEX11GQ96HA9 241 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 TIMP4Q99727 224 aa16.24■□□□□ 0.19
ERBB2-205ENST00000578199 J3QRE1 110 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 TFECO14948 347 aaPredicted RBP16.23■□□□□ 0.19
ERBB2-205ENST00000578199 NGFRP08138 427 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 PAICSP22234 425 aaKnown RBP16.23■□□□□ 0.19
ERBB2-205ENST00000578199 RPS7P62081 194 aaKnown RBP16.23■□□□□ 0.19
ERBB2-205ENST00000578199 FOXK2Q01167 660 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 NIPAL3Q6P499 406 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 MEPCEQ7L2J0 689 aaKnown RBP16.23■□□□□ 0.19
ERBB2-205ENST00000578199 OOSP2Q86WS3 158 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 SLC37A3Q8NCC5 494 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 ATP6V1C2Q8NEY4 427 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 ZDHHC1Q8WTX9 485 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 MMP28Q9H239 520 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 MN1Q10571 1320 aaPredicted RBP16.23■□□□□ 0.19
ERBB2-205ENST00000578199 KIR2DS5A0A0G2JLQ3 304 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 A0A0G2JNG1 304 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 TRDV1A0A1B0GX56 115 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 KIR2DS3K7RE56 304 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 AKAP8O43823 692 aaKnown RBP16.23■□□□□ 0.19
ERBB2-205ENST00000578199 S1PR1P21453 382 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 FGF9P31371 208 aaPredicted RBP16.23■□□□□ 0.19
ERBB2-205ENST00000578199 RAB38P57729 211 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 BTG2P78543 158 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 KRR1Q13601 381 aaKnown RBP16.23■□□□□ 0.19
ERBB2-205ENST00000578199 KIR2DS5Q14953 304 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 NDUFAF6Q330K2 333 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 AMZ1Q400G9 498 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 DDI2Q5TDH0 399 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 SMRP1Q8NCR6 262 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 NEIL3Q8TAT5 605 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 SIGLEC7Q9Y286 467 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 COL4A2P08572 1712 aa16.23■□□□□ 0.19
ERBB2-205ENST00000578199 HPGDSO60760 199 aa16.22■□□□□ 0.19
ERBB2-205ENST00000578199 CSF3P09919 207 aa16.22■□□□□ 0.19
ERBB2-205ENST00000578199 IL9P15248 144 aa16.22■□□□□ 0.19
ERBB2-205ENST00000578199 BMP8BP34820 402 aa16.22■□□□□ 0.19
ERBB2-205ENST00000578199 OR2B6P58173 313 aa16.22■□□□□ 0.19
ERBB2-205ENST00000578199 PYDC2Q56P42 97 aa16.22■□□□□ 0.19
ERBB2-205ENST00000578199 ZNF362Q5T0B9 420 aaPredicted RBP16.22■□□□□ 0.19
ERBB2-205ENST00000578199 PRPF38BQ5VTL8 546 aaKnown RBP16.22■□□□□ 0.19
ERBB2-205ENST00000578199 KIAA0895LQ68EN5 471 aa16.22■□□□□ 0.19
ERBB2-205ENST00000578199 ARMC6Q6NXE6 501 aa16.22■□□□□ 0.19
ERBB2-205ENST00000578199 TMEM91Q6ZNR0 172 aa16.22■□□□□ 0.19
ERBB2-205ENST00000578199 BMP8AQ7Z5Y6 402 aa16.22■□□□□ 0.19
ERBB2-205ENST00000578199 OR10H4Q8NGA5 316 aa16.22■□□□□ 0.19
ERBB2-205ENST00000578199 TMCO6Q96DC7 493 aa16.22■□□□□ 0.19
ERBB2-205ENST00000578199 TNFRSF13CQ96RJ3 184 aa16.22■□□□□ 0.19
ERBB2-205ENST00000578199 MED18Q9BUE0 208 aa16.22■□□□□ 0.19
ERBB2-205ENST00000578199 C8orf33Q9H7E9 229 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms