RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 OTUB1Q96FW1 271 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-217ENST00000577897 ALPK1Q96QP1 1244 aa12.9□□□□□ -0.34
SREBF1-217ENST00000577897 OR1F2PQ96R84 312 aa12.9□□□□□ -0.34
SREBF1-217ENST00000577897 FNDC11Q9BVV2 318 aa12.9□□□□□ -0.34
SREBF1-217ENST00000577897 AMBRA1Q9C0C7 1298 aa12.9□□□□□ -0.34
SREBF1-217ENST00000577897 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.9□□□□□ -0.34
SREBF1-217ENST00000577897 ADAP2Q9NPF8 381 aa12.9□□□□□ -0.34
SREBF1-217ENST00000577897 KRCC1Q9NPI7 259 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-217ENST00000577897 CUTCQ9NTM9 273 aa12.9□□□□□ -0.34
SREBF1-217ENST00000577897 SCN3BQ9NY72 215 aa12.9□□□□□ -0.34
SREBF1-217ENST00000577897 MGAT4BQ9UQ53 548 aa12.9□□□□□ -0.34
SREBF1-217ENST00000577897 CFL2Q9Y281 166 aa12.9□□□□□ -0.34
SREBF1-217ENST00000577897 MRPS2Q9Y399 296 aaKnown RBP12.9□□□□□ -0.34
SREBF1-217ENST00000577897 WDR45Q9Y484 360 aa12.9□□□□□ -0.34
SREBF1-217ENST00000577897 HS3ST3B1Q9Y662 390 aa12.9□□□□□ -0.34
SREBF1-217ENST00000577897 SCN3AQ9NY46 2000 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 AP3D1O14617 1153 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 HCRTR1O43613 425 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 LDB3O75112 727 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 DIRAS1O95057 198 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 LGI1O95970 557 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 CRYABP02511 175 aaKnown RBP12.89□□□□□ -0.35
SREBF1-217ENST00000577897 DBIP07108 87 aaKnown RBP12.89□□□□□ -0.35
SREBF1-217ENST00000577897 CTSBP07858 339 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 THBS1P07996 1170 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 PABPC4LP0CB38 370 aaKnown RBP12.89□□□□□ -0.35
SREBF1-217ENST00000577897 ALAS2P22557 587 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 PRKACGP22612 351 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 EEF1B2P24534 225 aaKnown RBP12.89□□□□□ -0.35
SREBF1-217ENST00000577897 MAN2A2P49641 1150 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 TNFSF10P50591 281 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 DAPP51397 102 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 LTB4RQ15722 352 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 DUSP7Q16829 419 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 PRICKLE4Q2TBC4 344 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 LIN52Q52LA3 116 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 ZNF691Q5VV52 312 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 KIRREL2Q6UWL6 708 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 DEF8Q6ZN54 512 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 TMEM179BQ7Z7N9 219 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 TSPYL5Q86VY4 417 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-217ENST00000577897 CHDHQ8NE62 594 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-217ENST00000577897 OR5T3Q8NGG3 340 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 NRGNQ92686 78 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 GIMAP5Q96F15 307 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 C16orf58Q96GQ5 468 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 PEX11GQ96HA9 241 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 FBXL20Q96IG2 436 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 MUS81Q96NY9 551 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 LMF1Q96S06 567 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 ENKD1Q9H0I2 346 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 SERHL2Q9H4I8 314 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 SOX17Q9H6I2 414 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-217ENST00000577897 ABI3Q9P2A4 366 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 PRODH2Q9UF12 536 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 TPRKBQ9Y3C4 175 aa12.89□□□□□ -0.35
SREBF1-217ENST00000577897 NCOA6Q14686 2063 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-217ENST00000577897 MPZL2O60487 215 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 PRAMEF2O60811 474 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 CHRM4P08173 479 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 ATP6V1B1P15313 513 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 IL7RP16871 459 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 GABRA4P48169 554 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 UGT2B15P54855 530 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 PSMD4P55036 377 aaKnown RBP12.88□□□□□ -0.35
SREBF1-217ENST00000577897 GABARAPL2P60520 117 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 CXCR4P61073 352 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 POU6F2P78424 691 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-217ENST00000577897 IL5RAQ01344 420 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 DUSP2Q05923 314 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 ZNF155Q12901 538 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-217ENST00000577897 NPRL3Q12980 569 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 EXOC3L2Q2M3D2 409 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 IQCCQ4KMZ1 466 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 RRM2BQ7LG56 351 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 PRSS41Q7RTY9 318 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 RANBP3LQ86VV4 465 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-217ENST00000577897 ZNF619Q8N2I2 560 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 ARHGEF39Q8N4T4 335 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 OR7G1Q8NGA0 311 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 OR52P1PQ8NH57 321 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 OR51Q1Q8NH59 317 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 GPR151Q8TDV0 419 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 NACC2Q96BF6 587 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 ANKRD9Q96BM1 317 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-217ENST00000577897 SLC35A4Q96G79 324 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 ART5Q96L15 291 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 PRRC1Q96M27 445 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 MBOAT4Q96T53 435 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 YIPF2Q9BWQ6 316 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 GABARAPL3Q9BY60 117 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 ALOXE3Q9BYJ1 711 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 ANKRD19PQ9H560 264 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 ZNF160Q9HCG1 818 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 SLC22A11Q9NSA0 550 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 ACER3Q9NUN7 267 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 MAT2BQ9NZL9 334 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 HCN3Q9P1Z3 774 aa12.88□□□□□ -0.35
SREBF1-217ENST00000577897 MAGED1Q9Y5V3 778 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms