RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 DHRS4L2Q6PKH6 230 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 LAPTM4BQ86VI4 370 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 CHERPQ8IWX8 916 aaKnown RBP9.34□□□□□ -0.91
SS18-207ENST00000577636 ZNF619Q8N2I2 560 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 SETD9Q8NE22 299 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 METTL21AQ8WXB1 218 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 HAS2Q92819 552 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 DAZLQ92904 295 aaKnown RBP9.34□□□□□ -0.91
SS18-207ENST00000577636 LMF2Q9BU23 707 aaKnown RBP9.34□□□□□ -0.91
SS18-207ENST00000577636 FNDC11Q9BVV2 318 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 AMBRA1Q9C0C7 1298 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 SLC26A1Q9H2B4 701 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 SLC38A1Q9H2H9 487 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 SMURF2Q9HAU4 748 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 FOLH1BQ9HBA9 442 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 COPS7AQ9UBW8 275 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 TINAGQ9UJW2 476 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 MKL2Q9ULH7 1088 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 OR10H1Q9Y4A9 318 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 KCNE3Q9Y6H6 103 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 AKAP9Q99996 3911 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 OTOGQ6ZRI0 2925 aa9.34□□□□□ -0.91
SS18-207ENST00000577636 ZFHX3Q15911 3703 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 DSPPQ9NZW4 1301 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 NADKO95544 446 aaPredicted RBP9.33□□□□□ -0.92
SS18-207ENST00000577636 SNAP29O95721 258 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 OXSR1O95747 527 aaPredicted RBP9.33□□□□□ -0.92
SS18-207ENST00000577636 CBX7O95931 251 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 ONECUT2O95948 504 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 LGI1O95970 557 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 H1F0P07305 194 aaKnown RBP9.33□□□□□ -0.92
SS18-207ENST00000577636 HEXBP07686 556 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 THBS1P07996 1170 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 GUSBP08236 651 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 CT62P0C5K7 136 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 PRKACGP22612 351 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 IFNGR2P38484 337 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 GCGRP47871 477 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 RGS8P57771 180 aaPredicted RBP9.33□□□□□ -0.92
SS18-207ENST00000577636 PSPHP78330 225 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 ADORA2A-AS1P86434 159 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 TLE4Q04727 773 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 FUT5Q11128 374 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 PPP1R8Q12972 351 aaKnown RBP9.33□□□□□ -0.92
SS18-207ENST00000577636 DUSP8Q13202 625 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 BLMHQ13867 455 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 GANABQ14697 944 aaKnown RBP9.33□□□□□ -0.92
SS18-207ENST00000577636 CDSNQ15517 529 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 GPR68Q15743 365 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 MAPK11Q15759 364 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 MICAQ29983 383 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 CYP27C1Q4G0S4 372 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 FLYWCH1Q4VC44 716 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 DCST1Q5T197 706 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 HLA-DQA1Q5Y7H0 255 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 TBPL2Q6SJ96 375 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 UGT2A3Q6UWM9 527 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 NCCRP1Q6ZVX7 275 aaPredicted RBP9.33□□□□□ -0.92
SS18-207ENST00000577636 NDUFAF7Q7L592 441 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 WDR53Q7Z5U6 358 aaPredicted RBP9.33□□□□□ -0.92
SS18-207ENST00000577636 CDH24Q86UP0 819 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 RANBP3LQ86VV4 465 aaPredicted RBP9.33□□□□□ -0.92
SS18-207ENST00000577636 C8orf59Q8N0T1 100 aaPredicted RBP9.33□□□□□ -0.92
SS18-207ENST00000577636 OR10G2Q8NGC3 310 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 OR52J3Q8NH60 311 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 OR14A16Q8NHC5 309 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 PSMF1Q92530 271 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 RMND5BQ96G75 393 aaPredicted RBP9.33□□□□□ -0.92
SS18-207ENST00000577636 ALPK1Q96QP1 1244 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 SDF2Q99470 211 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 APOL4Q9BPW4 351 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 OR10A5Q9H207 317 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 TOR3AQ9H497 397 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 RIBC2Q9H4K1 309 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 KRCC1Q9NPI7 259 aaPredicted RBP9.33□□□□□ -0.92
SS18-207ENST00000577636 NECTIN3Q9NQS3 549 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 LANCL2Q9NS86 450 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 STMN3Q9NZ72 180 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 ABI3Q9P2A4 366 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 MKLN1Q9UL63 735 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 ERVK-19Q9WJR5 959 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 ZNF443Q9Y2A4 671 aaPredicted RBP9.33□□□□□ -0.92
SS18-207ENST00000577636 MYRFQ9Y2G1 1151 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 POFUT2Q9Y2G5 429 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 LYVE1Q9Y5Y7 322 aa9.33□□□□□ -0.92
SS18-207ENST00000577636 APCP25054 2843 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 PKDREJQ9NTG1 2253 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 PRAMEF27A3QJZ7 478 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 ARRDC5A6NEK1 342 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 AGAP5A6NIR3 686 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 TMEM229AB2RXF0 380 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 FAAHO00519 579 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 ZNHIT1O43257 154 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 SLC19A2O60779 497 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 CLDN14O95500 239 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 SERPINA7P05543 415 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 ITGAMP11215 1152 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 COX6A1P12074 109 aa9.32□□□□□ -0.92
SS18-207ENST00000577636 TRHRP34981 398 aaPredicted RBP9.32□□□□□ -0.92
SS18-207ENST00000577636 KRT20P35900 424 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms