RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 TNFAIP8L2Q6P589 184 aaPredicted RBP12.31□□□□□ -0.44
RAB40B-204ENST00000571554 C22orf34Q6ZV56 151 aa12.31□□□□□ -0.44
RAB40B-204ENST00000571554 ESPNLQ6ZVH7 1005 aa12.31□□□□□ -0.44
RAB40B-204ENST00000571554 MTERF4Q7Z6M4 381 aaKnown RBP12.31□□□□□ -0.44
RAB40B-204ENST00000571554 OSTF1Q92882 214 aa12.31□□□□□ -0.44
RAB40B-204ENST00000571554 RAB8BQ92930 207 aa12.31□□□□□ -0.44
RAB40B-204ENST00000571554 KLHL15Q96M94 604 aa12.31□□□□□ -0.44
RAB40B-204ENST00000571554 SDF2Q99470 211 aa12.31□□□□□ -0.44
RAB40B-204ENST00000571554 SLC39A3Q9BRY0 314 aa12.31□□□□□ -0.44
RAB40B-204ENST00000571554 SRXN1Q9BYN0 137 aa12.31□□□□□ -0.44
RAB40B-204ENST00000571554 HOXD1Q9GZZ0 328 aa12.31□□□□□ -0.44
RAB40B-204ENST00000571554 MARCOQ9UEW3 520 aaPredicted RBP12.31□□□□□ -0.44
RAB40B-204ENST00000571554 KCNE5Q9UJ90 142 aa12.31□□□□□ -0.44
RAB40B-204ENST00000571554 MKLN1Q9UL63 735 aa12.31□□□□□ -0.44
RAB40B-204ENST00000571554 ICAM5Q9UMF0 924 aa12.31□□□□□ -0.44
RAB40B-204ENST00000571554 EMC9Q9Y3B6 208 aa12.31□□□□□ -0.44
RAB40B-204ENST00000571554 DTNAQ9Y4J8 743 aa12.31□□□□□ -0.44
RAB40B-204ENST00000571554 HEATR5AQ86XA9 2040 aa12.31□□□□□ -0.44
RAB40B-204ENST00000571554 IGHV3-15A0A0B4J1V0 119 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 GOLGA8QA0A0J9YX86 632 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 GOLGA8OA6NCC3 632 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 DEFB108AA8MXU0 73 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 ESPNB1AK53 854 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 NPIPB9F8W1W9 429 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 GOLGA8NF8WBI6 632 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 C16orf97H3BN30 126 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 RNASET2O00584 256 aaKnown RBP12.3□□□□□ -0.44
RAB40B-204ENST00000571554 ZNF195O14628 629 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 ADAMDEC1O15204 470 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 FCMRO60667 390 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 ALDOCP09972 364 aaKnown RBP12.3□□□□□ -0.44
RAB40B-204ENST00000571554 OR12D1P0DN82 309 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 KITP10721 976 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 CD99P14209 185 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 LBPP18428 481 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 KLK2P20151 261 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 SMU1Q2TAY7 513 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 TMEM176BQ3YBM2 270 aaPredicted RBP12.3□□□□□ -0.44
RAB40B-204ENST00000571554 BHLHB9Q6PI77 547 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 C16orf62Q7Z3J2 963 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 TGIF2LYQ8IUE0 185 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 GPR119Q8TDV5 335 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 ABHD3Q8WU67 409 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 GMPPAQ96IJ6 420 aaPredicted RBP12.3□□□□□ -0.44
RAB40B-204ENST00000571554 TEX37Q96LM6 180 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 HHATLQ9HCP6 504 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 ELOVL5Q9NYP7 299 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 PCDHGB4Q9UN71 923 aa12.3□□□□□ -0.44
RAB40B-204ENST00000571554 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.3□□□□□ -0.44
RAB40B-204ENST00000571554 ZNF469Q96JG9 3925 aaPredicted RBP12.3□□□□□ -0.44
RAB40B-204ENST00000571554 C2CD3Q4AC94 2353 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 A0A1W2PNR3 127 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 TMEM120BA0PK00 339 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 ANKRD28O15084 1053 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 SCN2BO60939 215 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 SS18L1O75177 396 aaPredicted RBP12.29□□□□□ -0.44
RAB40B-204ENST00000571554 UBL4AP11441 157 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 PRKCAP17252 672 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 WDR4P57081 412 aaKnown RBP12.29□□□□□ -0.44
RAB40B-204ENST00000571554 CARD18P57730 90 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 UFM1P61960 85 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 PPP2R2AP63151 447 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 OCRLQ01968 901 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 FOXD4Q12950 439 aaPredicted RBP12.29□□□□□ -0.44
RAB40B-204ENST00000571554 FGFBP1Q14512 234 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 QPRTQ15274 297 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 ZNF239Q16600 458 aaKnown RBP12.29□□□□□ -0.44
RAB40B-204ENST00000571554 DEFB113Q30KQ7 82 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 FAM174BQ3ZCQ3 159 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 PDSS1Q5T2R2 415 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 CHDHQ8NE62 594 aaPredicted RBP12.29□□□□□ -0.44
RAB40B-204ENST00000571554 OR8J2Q8NGG1 315 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 OR6K3Q8NGY3 331 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 XAGE5Q8WWM1 108 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 DNAJA3Q96EY1 480 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 HS3ST6Q96QI5 342 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 ALPK1Q96QP1 1244 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 THUMPD3Q9BV44 507 aaKnown RBP12.29□□□□□ -0.44
RAB40B-204ENST00000571554 TMUB1Q9BVT8 246 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 QRSL1Q9H0R6 528 aaKnown RBP12.29□□□□□ -0.44
RAB40B-204ENST00000571554 WDR55Q9H6Y2 383 aaPredicted RBP12.29□□□□□ -0.44
RAB40B-204ENST00000571554 UBTD1Q9HAC8 227 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 MEAF6Q9HAF1 191 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 ZNF226Q9NYT6 803 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 HAO1Q9UJM8 370 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 EDARQ9UNE0 448 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 ACTL7BQ9Y614 415 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 MTORP42345 2549 aa12.29□□□□□ -0.44
RAB40B-204ENST00000571554 PRSS51A0A1B0GVH4 220 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 SERINC4A6NH21 518 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 SDHDO14521 159 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 ZNF264O43296 627 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 BCAS1O75363 584 aaPredicted RBP12.28□□□□□ -0.44
RAB40B-204ENST00000571554 STX11O75558 287 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 UGT2B17O75795 530 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 TUBBP07437 444 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 UBTFL6P0CB48 400 aaPredicted RBP12.28□□□□□ -0.44
RAB40B-204ENST00000571554 CD53P19397 219 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 UQCRC2P22695 453 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 CRYGSP22914 178 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms