RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 TBX21Q9UL17 535 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 NPIPA5A0A0B4J1W7 369 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 A0A1W2PRG6 482 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 NPIPA7E9PJI5 369 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 BHLHE40O14503 412 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 NPIPA8P0DM63 369 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 SNRPBP14678 240 aaKnown RBP16.22■□□□□ 0.19
SCARF1-205ENST00000571272 ENPP1P22413 925 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 ZNF136P52737 540 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 FGFBP1Q14512 234 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 POU4F3Q15319 338 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-205ENST00000571272 OR52E1Q8NGJ3 308 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 TEAD3Q99594 435 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 DPCDQ9BVM2 203 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-205ENST00000571272 CDCP1Q9H5V8 836 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 DEC1Q9P2X7 70 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 SLC27A6Q9Y2P4 619 aa16.22■□□□□ 0.19
SCARF1-205ENST00000571272 PRR23AA6NEV1 266 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 PYCR1P32322 319 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 MAPK14Q16539 360 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 ACSM3Q53FZ2 586 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 MFSD12Q6NUT3 480 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 YIPF5Q969M3 257 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 CCDC120Q96HB5 630 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 HS6ST2Q96MM7 605 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 DHRS9Q9BPW9 319 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 MTHFD2LQ9H903 347 aaPredicted RBP16.21■□□□□ 0.19
SCARF1-205ENST00000571272 EMC7Q9NPA0 242 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 GLTPQ9NZD2 209 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 ACSL5Q9ULC5 683 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 TMEM5Q9Y2B1 443 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 PRR23D1E9PI22 279 aaPredicted RBP16.21■□□□□ 0.19
SCARF1-205ENST00000571272 FGF19O95750 216 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 PAK4O96013 591 aaPredicted RBP16.21■□□□□ 0.19
SCARF1-205ENST00000571272 PRR23D2P0DMB1 279 aaPredicted RBP16.21■□□□□ 0.19
SCARF1-205ENST00000571272 IL9P15248 144 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 DRD5P21918 477 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 HTR2AP28223 471 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 DUSP5Q16690 384 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 PRSS45Q7RTY3 260 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 LUZP2Q86TE4 346 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 ETFBKMTQ8IXQ9 262 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 OR2L3Q8NG85 312 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 OR13C2Q8NGS9 318 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 OR5J2Q8NH18 312 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 OR51A7Q8NH64 312 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 BRIX1Q8TDN6 353 aaKnown RBP16.21■□□□□ 0.19
SCARF1-205ENST00000571272 HHIPL1Q96JK4 782 aa16.21■□□□□ 0.19
SCARF1-205ENST00000571272 CACYBPQ9HB71 228 aaKnown RBP16.21■□□□□ 0.19
SCARF1-205ENST00000571272 CIB4A0PJX0 185 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 CDHR4A6H8M9 788 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 PLPP2O43688 288 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 MT-ND4P03905 459 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 RAF1P04049 648 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 NUDT1P36639 197 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 HCCSP53701 268 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 FOXK2Q01167 660 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 IZUMO1Q8IYV9 350 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 ZNF687Q8N1G0 1237 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 GHSRQ92847 366 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 ORAI3Q9BRQ5 295 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 GSDMCQ9BYG8 508 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 KRCC1Q9NPI7 259 aaPredicted RBP16.2■□□□□ 0.18
SCARF1-205ENST00000571272 NKIRAS2Q9NYR9 191 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 MRPS23Q9Y3D9 190 aaKnown RBP16.2■□□□□ 0.18
SCARF1-205ENST00000571272 NUBP2Q9Y5Y2 271 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 TRAV27A0A087WT01 109 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 LOC105371267A0A1B0GV96 52 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 ANKRD34CP0C6C1 535 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 LINC00271P0C7V0 271 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 SAGP10523 405 aaPredicted RBP16.2■□□□□ 0.18
SCARF1-205ENST00000571272 HEPHL1Q6MZM0 1159 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 MRPL43Q8N983 215 aaKnown RBP16.2■□□□□ 0.18
SCARF1-205ENST00000571272 TMEM239Q8WW34 195 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 SUSD6Q92537 303 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 OMA1Q96E52 524 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 RNF208Q9H0X6 261 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 HEXA-AS1Q9H8Q6 139 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 COQ3Q9NZJ6 369 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 XIRP2A4UGR9 3374 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 CARNS1A5YM72 827 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 DUXAA6NLW8 204 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 TOXO94900 526 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 RAB3BP20337 219 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 WASP42768 502 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 ZNF81P51508 661 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 ID2Q02363 134 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 ST3GAL2Q16842 350 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 MTSS1LQ765P7 747 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 SSX6Q7RTT6 188 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 ADGRD2Q7Z7M1 963 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 NRROSQ86YC3 692 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 RFLNBQ8N5W9 214 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 OR2L8Q8NGY9 312 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 WDR26Q9H7D7 661 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 FBXO34Q9NWN3 711 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 CLDND1Q9NY35 253 aa16.2■□□□□ 0.18
SCARF1-205ENST00000571272 MRPL15Q9P015 296 aaKnown RBP16.2■□□□□ 0.18
SCARF1-205ENST00000571272 SPEF1Q9Y4P9 236 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms