RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 PLEKHA6Q9Y2H5 1048 aa15.3■□□□□ 0.04
MAP1LC3B-208ENST00000570189 A0A1W2PPR1 153 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 GJE1A6NN92 205 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 DEFB108AA8MXU0 73 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 GMFGO60234 142 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 STX11O75558 287 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 SYNGR4O95473 234 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 PABPC4LP0CB38 370 aaKnown RBP15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 PPP3CBP16298 524 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 PRKCAP17252 672 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 BGNP21810 368 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 MATN1P21941 496 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 SIRPAP78324 504 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 BST1Q10588 318 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 FOXF1Q12946 379 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 CASP8Q14790 479 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 FBXW10Q5XX13 1052 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 HBMQ6B0K9 141 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 GTF2IRD2BQ6EKJ0 949 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 GTF2IRD2Q86UP8 949 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 CLECL1Q8IZS7 167 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 LILRA2Q8N149 483 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 ZNF610Q8N9Z0 462 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 OR5D16Q8NGK9 328 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 OR5AK3PQ8NH89 298 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 RAB3IL1Q8TBN0 382 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 RNF128Q8TEB7 428 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 CPNE4Q96A23 557 aaPredicted RBP15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 SAP130Q9H0E3 1048 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 PCDHGB4Q9UN71 923 aa15.29■□□□□ 0.04
MAP1LC3B-208ENST00000570189 ZFHX3Q15911 3703 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 RNF103-CHMP3A0A140T963 221 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 ESPNB1AK53 854 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 TNFSF11O14788 317 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 SIAH2O43255 324 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 ZNF264O43296 627 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 OIP5O43482 229 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 EFNA2O43921 213 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 CXCL13O43927 109 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 SNNO75324 88 aaPredicted RBP15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 UQCRC2P22695 453 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 PHC1P78364 1004 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 TXNL4AP83876 142 aaKnown RBP15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 SKP2Q13309 424 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 ZNF239Q16600 458 aaKnown RBP15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 DEFB113Q30KQ7 82 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 SAXO2Q658L1 398 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 FAM71CQ8NEG0 241 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 OR5W2Q8NH69 310 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 NEURL3Q96EH8 262 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 SLC35G5Q96KT7 338 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 NUF2Q9BZD4 464 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 PRRG4Q9BZD6 226 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 LAT2Q9GZY6 243 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 FANCFQ9NPI8 374 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 TIGARQ9NQ88 270 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 EXD2Q9NVH0 621 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 BEX4Q9NWD9 120 aaPredicted RBP15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 BTNL2Q9UIR0 455 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 CARD8Q9Y2G2 431 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 FREM1Q5H8C1 2179 aa15.28■□□□□ 0.04
MAP1LC3B-208ENST00000570189 SETD2Q9BYW2 2564 aaPredicted RBP15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 NPIPA5A0A0B4J1W7 369 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 SERINC4A6NH21 518 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 E9PBE3 544 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 NPIPA7E9PJI5 369 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 ZNF195O14628 629 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 KIAA0513O60268 411 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 NPIPA8P0DM63 369 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 UBL4AP11441 157 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 CD53P19397 219 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 SOAT1P35610 550 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 CTBP2P56545 445 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 CARD18P57730 90 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 LRRC74AQ0VAA2 488 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 SELENBP1Q13228 472 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 CBFBQ13951 182 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 KEAP1Q14145 624 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 RNPS1Q15287 305 aaKnown RBP15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 BEND4Q6ZU67 534 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 OR4A15Q8NGL6 344 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 FBXO27Q8NI29 283 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 ST8SIA1Q92185 356 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 OSTF1Q92882 214 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 CCDC115Q96NT0 180 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 PIP5K1AQ99755 562 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 MED18Q9BUE0 208 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 KCNK9Q9NPC2 374 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 THAP1Q9NVV9 213 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 KCNE5Q9UJ90 142 aa15.27■□□□□ 0.04
MAP1LC3B-208ENST00000570189 FLNAP21333 2647 aaKnown RBP15.27■□□□□ 0.03
MAP1LC3B-208ENST00000570189 GTPBP1O00178 669 aaKnown RBP15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 SDHDO14521 159 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 FCMRO60667 390 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 UGT2B17O75795 530 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 PLGP00747 810 aaPredicted RBP15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 ALDOCP09972 364 aaKnown RBP15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 CD99P14209 185 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 FOSL1P15407 271 aa15.26■□□□□ 0.03
MAP1LC3B-208ENST00000570189 LOXP28300 417 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms