RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 NUDT14O95848 222 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 ENO1P06733 434 aaKnown RBP10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 TAC1P20366 129 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 IGHV1-2P23083 117 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 PTAFRP25105 342 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 CD40P25942 277 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 SLC7A1P30825 629 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 GPC1P35052 558 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 SERPINB9P50453 376 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 FABP6P51161 128 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 EFNA4P52798 201 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 RAC3P60763 192 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 C2orf54Q08AI8 447 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 LCP2Q13094 533 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 TRADDQ15628 312 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 CD226Q15762 336 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 TMEM176BQ3YBM2 270 aaPredicted RBP10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 UNC50Q53HI1 259 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 TEX35Q5T0J7 233 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 ZNF544Q6NX49 715 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 KLHL17Q6TDP4 642 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 IKBIPQ70UQ0 350 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 ZNF551Q7Z340 670 aaPredicted RBP10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 ZAR1Q86SH2 424 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 DEPDC4Q8N2C3 294 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 CEP70Q8NHQ1 597 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 FAM76AQ8TAV0 307 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 FBXO30Q8TB52 745 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 FAM110BQ8TC76 370 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 MS4A4EQ96PG1 132 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 TMEM237Q96Q45 408 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 IQCGQ9H095 443 aaKnown RBP10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 ING1Q9UK53 422 aaPredicted RBP10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 TIMM22Q9Y584 194 aa10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 GPC6Q9Y625 555 aaPredicted RBP10.41□□□□□ -0.74
GTF3C1-209ENST00000568569 SERTM1A2A2V5 107 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 EFNA2O43921 213 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 KIAA0513O60268 411 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 SERPINB4P48594 390 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 PRKAG1P54619 331 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 PKNOX1P55347 436 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 SUMO3P55854 103 aaPredicted RBP10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 ZNF117Q03924 483 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 SPOCK1Q08629 439 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 RASGEF1BQ0VAM2 473 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 SELENBP1Q13228 472 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 GGTLC2Q14390 218 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 DUSP5Q16690 384 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 IMPG1Q17R60 797 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 ARL13AQ5H913 290 aaPredicted RBP10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 B3GLCTQ6Y288 498 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 SZRD1Q7Z422 152 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 MTERF4Q7Z6M4 381 aaKnown RBP10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 ZNF433Q8N7K0 673 aaPredicted RBP10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 COX18Q8N8Q8 333 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 SLC16A11Q8NCK7 471 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 ATP6V1C2Q8NEY4 427 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 FBXO27Q8NI29 283 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 PHOSPHO1Q8TCT1 267 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 MSI2Q96DH6 328 aaKnown RBP10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 KCNA7Q96RP8 456 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 PAFAH2Q99487 392 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 INPP5KQ9BT40 448 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 EML4Q9HC35 981 aaKnown RBP10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 POLR3HQ9Y535 204 aaPredicted RBP10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 MALRD1Q5VYJ5 2156 aa10.4□□□□□ -0.74
GTF3C1-209ENST00000568569 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 ZNF724A8MTY0 619 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 NDUFS8O00217 210 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 PDPK1O15530 556 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 CYTIPO60759 359 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 RAD51DO75771 328 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 HSPA4LO95757 839 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 ALOX5P09917 674 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 ACP2P11117 423 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 APEHP13798 732 aaKnown RBP10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 EDNRAP25101 427 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 ZNF83P51522 516 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 P2RX1P51575 399 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 CHRNB3Q05901 458 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 CCNJQ5T5M9 372 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 GALNT5Q7Z7M9 940 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 MEX3DQ86XN8 651 aaKnown RBP10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 ZNF100Q8IYN0 542 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 RFLNBQ8N5W9 214 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 ZNF527Q8NB42 609 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 NUP43Q8NFH3 380 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 OR52N5Q8NH56 324 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 ZFP28Q8NHY6 868 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 GIMAP5Q96F15 307 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 MRGPRX4Q96LA9 322 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 ZNF300Q96RE9 604 aaPredicted RBP10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 PIMREGQ9BSJ6 248 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 FUT8Q9BYC5 575 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 NINJ2Q9NZG7 142 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 NTMQ9P121 344 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 ACTL7BQ9Y614 415 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 SLC25A15Q9Y619 301 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 FKBP7Q9Y680 259 aa10.39□□□□□ -0.75
GTF3C1-209ENST00000568569 PMF1-BGLAPU3KQ54 211 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms