RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 TOMM34Q15785 309 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-222ENST00000568034 SAMD4BQ5PRF9 694 aaKnown RBP16.33■□□□□ 0.2
COMMD4-222ENST00000568034 TRILQ7L0X0 811 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 PRICKLE2Q7Z3G6 844 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 YRDCQ86U90 279 aaKnown RBP16.33■□□□□ 0.2
COMMD4-222ENST00000568034 GRAMD2AQ8IUY3 354 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 FAM156AQ8NDB6 213 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 TOR1AIP2Q8NFQ8 470 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 OR5W2Q8NH69 310 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 ZNF607Q96SK3 696 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 MED17Q9NVC6 651 aa16.33■□□□□ 0.2
COMMD4-222ENST00000568034 MRPS18CQ9Y3D5 142 aaKnown RBP16.33■□□□□ 0.2
COMMD4-222ENST00000568034 A0A1B0GVC2 190 aa16.32■□□□□ 0.2
COMMD4-222ENST00000568034 CYP7B1O75881 506 aa16.32■□□□□ 0.2
COMMD4-222ENST00000568034 WISP1O95388 367 aa16.32■□□□□ 0.2
COMMD4-222ENST00000568034 LINGO3P0C6S8 592 aa16.32■□□□□ 0.2
COMMD4-222ENST00000568034 EDN3P14138 238 aa16.32■□□□□ 0.2
COMMD4-222ENST00000568034 KDELR2P33947 212 aa16.32■□□□□ 0.2
COMMD4-222ENST00000568034 TMEM44Q2T9K0 475 aa16.32■□□□□ 0.2
COMMD4-222ENST00000568034 PLPPR5Q32ZL2 321 aa16.32■□□□□ 0.2
COMMD4-222ENST00000568034 WIPI1Q5MNZ9 446 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-222ENST00000568034 ARMC8Q8IUR7 673 aa16.32■□□□□ 0.2
COMMD4-222ENST00000568034 SMYD1Q8NB12 490 aa16.32■□□□□ 0.2
COMMD4-222ENST00000568034 GPR119Q8TDV5 335 aa16.32■□□□□ 0.2
COMMD4-222ENST00000568034 WFDC6Q9BQY6 131 aa16.32■□□□□ 0.2
COMMD4-222ENST00000568034 SPATA5L1Q9BVQ7 753 aa16.32■□□□□ 0.2
COMMD4-222ENST00000568034 PTGES2Q9H7Z7 377 aa16.32■□□□□ 0.2
COMMD4-222ENST00000568034 SEC14L3Q9UDX4 400 aa16.32■□□□□ 0.2
COMMD4-222ENST00000568034 DKKL1Q9UK85 242 aa16.32■□□□□ 0.2
COMMD4-222ENST00000568034 PRRC2CQ9Y520 2896 aaKnown RBP16.31■□□□□ 0.2
COMMD4-222ENST00000568034 ETV2O00321 342 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-222ENST00000568034 CXCR6O00574 342 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 AP3D1O14617 1153 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 ZNHIT1O43257 154 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 FRS3O43559 492 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 CDC40O60508 579 aaKnown RBP eCLIP16.31■□□□□ 0.2
COMMD4-222ENST00000568034 HCN1O60741 890 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 SERPINB7O75635 380 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 TRAPPC6AO75865 159 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 NCK1P16333 377 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 HK1P19367 917 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 GGT1P19440 569 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 KCNJ5P48544 419 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 TOMM20Q15388 145 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 DUSP7Q16829 419 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 ZSWIM7Q19AV6 140 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 SPATS1Q496A3 300 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 KRTCAP3Q53RY4 240 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 TMCO5AQ8N6Q1 288 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 ST6GALNAC3Q8NDV1 305 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 NEIL3Q8TAT5 605 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 POC1BQ8TC44 478 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 PINK1Q9BXM7 581 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 TAS2R10Q9NYW0 307 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 SPRR3Q9UBC9 169 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 EGFL7Q9UHF1 273 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 PRPF19Q9UMS4 504 aaKnown RBP16.31■□□□□ 0.2
COMMD4-222ENST00000568034 ZNF232Q9UNY5 417 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 VDAC3Q9Y277 283 aa16.31■□□□□ 0.2
COMMD4-222ENST00000568034 ZGRF1Q86YA3 2104 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 A0A087WZY1 265 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 TRGV5A0A0B4J1U4 118 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 SHISA8B8ZZ34 492 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 NTN1O95631 604 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 GKN3PP0CG01 181 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 PRG2P13727 222 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 TCN1P20061 433 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-222ENST00000568034 TCEA1P23193 301 aaKnown RBP16.3■□□□□ 0.2
COMMD4-222ENST00000568034 PSMA4P25789 261 aaKnown RBP16.3■□□□□ 0.2
COMMD4-222ENST00000568034 MSX2P35548 267 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-222ENST00000568034 ACAA2P42765 397 aaKnown RBP16.3■□□□□ 0.2
COMMD4-222ENST00000568034 CCR4P51679 360 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 GFRA1P56159 465 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 DLX5P56178 289 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 EPS8Q12929 822 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 CBFBQ13951 182 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 LRRC23Q53EV4 343 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-222ENST00000568034 ARHGAP24Q8N264 748 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 GHDCQ8N2G8 530 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 OR14L1PQ8NHC6 308 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 FIG4Q92562 907 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 SLC35B4Q969S0 331 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 CLPTM1LQ96KA5 538 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 CACYBPQ9HB71 228 aaKnown RBP16.3■□□□□ 0.2
COMMD4-222ENST00000568034 RPH3AQ9Y2J0 694 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-222ENST00000568034 SLC6A5Q9Y345 797 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 POLEQ07864 2286 aa16.3■□□□□ 0.2
COMMD4-222ENST00000568034 A0A1B0GTH9 108 aa16.29■□□□□ 0.2
COMMD4-222ENST00000568034 C7orf72A4D263 438 aa16.29■□□□□ 0.2
COMMD4-222ENST00000568034 SYT5O00445 386 aa16.29■□□□□ 0.2
COMMD4-222ENST00000568034 FAAHO00519 579 aa16.29■□□□□ 0.2
COMMD4-222ENST00000568034 AQP7O14520 342 aa16.29■□□□□ 0.2
COMMD4-222ENST00000568034 SUSD5O60279 629 aa16.29■□□□□ 0.2
COMMD4-222ENST00000568034 PDE5AO76074 875 aa16.29■□□□□ 0.2
COMMD4-222ENST00000568034 LGI1O95970 557 aa16.29■□□□□ 0.2
COMMD4-222ENST00000568034 PRKCAP17252 672 aa16.29■□□□□ 0.2
COMMD4-222ENST00000568034 ZNF136P52737 540 aa16.29■□□□□ 0.2
COMMD4-222ENST00000568034 NCALDP61601 193 aa16.29■□□□□ 0.2
COMMD4-222ENST00000568034 C19orf57Q0VDD7 668 aa16.29■□□□□ 0.2
COMMD4-222ENST00000568034 FOXF1Q12946 379 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms