RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 COQ7Q99807 217 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 TSG101Q99816 390 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 APOOQ9BUR5 198 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 ACAT2Q9BWD1 397 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 YTHDF1Q9BYJ9 559 aaKnown RBP2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 PARVGQ9HBI0 331 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 PARVBQ9HBI1 364 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 TIGARQ9NQ88 270 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 ZNF275Q9NSD4 429 aaPredicted RBP2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 FKBP14Q9NWM8 211 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 FETUBQ9UGM5 382 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 TRPM7Q96QT4 1865 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 SCN4AP35499 1836 aa2.77□□□□□ -1.97
HERPUD1-212ENST00000567944 TIAM2Q8IVF5 1701 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 NRXN2Q9P2S2 1712 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 ADAMTS7Q9UKP4 1686 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 IGKV6D-41A0A0C4DH26 115 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 MFSD2BA6NFX1 497 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 SLC9B1P1A6NJY1 282 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 A8MX80 341 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 FAM220BPB1ANY3 271 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 BOLA2-SMG1P6H3BVE0 249 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 SLC17A2O00624 439 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 NDUFAB1O14561 156 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 YKT6O15498 198 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 ATP8B1O43520 1251 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 NMT2O60551 498 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 SDC3O75056 442 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 SMIM24O75264 130 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 ZNF189O75820 626 aaPredicted RBP2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 BCAS2O75934 225 aaPredicted RBP2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 DUSP14O95147 198 aaKnown RBP2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 SLC2A10O95528 541 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 IGSF6O95976 241 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 ALPIP09923 528 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 CT45A10P0DMU9 189 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 S100A1P23297 94 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 AHCYP23526 432 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 SLC6A8P48029 635 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 ALDH3B2P48448 385 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 POLR2FP61218 127 aaKnown RBP2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 NCBP1Q09161 790 aaKnown RBP2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 AP1B1Q10567 949 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 CBX3Q13185 183 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 PPP2R5CQ13362 524 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 PKN2Q16513 984 aaKnown RBP2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 GSG1Q2KHT4 349 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 LRIT3Q3SXY7 679 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 RABL6Q3YEC7 729 aaPredicted RBP2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 CCDC153Q494R4 210 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 ACSF3Q4G176 576 aaPredicted RBP2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 AGKQ53H12 422 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 C9orf129Q5T035 196 aaKnown RBP2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 PRR5LQ6MZQ0 368 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 RANBP3LQ86VV4 465 aaPredicted RBP2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 LRRC17Q8N6Y2 441 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 Q8N9G6 341 aaPredicted RBP2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 SPERTQ8NA61 448 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 OR8H1Q8NGG4 311 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 BADQ92934 168 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 SNF8Q96H20 258 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 API5Q9BZZ5 524 aaKnown RBP2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 SLC7A5P2Q9GIP4 190 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 FAM124BQ9H5Z6 455 aaPredicted RBP2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 MEPEQ9NQ76 525 aaPredicted RBP2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 ABCB10Q9NRK6 738 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 SENP1Q9P0U3 644 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 SLC9A8Q9Y2E8 581 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 NTNG1Q9Y2I2 539 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 ADAMTSL1Q8N6G6 1762 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 NSD3Q9BZ95 1437 aa2.76□□□□□ -1.97
HERPUD1-212ENST00000567944 ANKRD36BQ8N2N9 1353 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 RPAP1Q9BWH6 1393 aaPredicted RBP2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 PLEKHG2Q9H7P9 1386 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 ARFGEF2Q9Y6D5 1785 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 CCDC169A6NNP5 214 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 H3BMH7 237 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 CDX4O14627 284 aaPredicted RBP2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 IMPA2O14732 288 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 BIRC5O15392 142 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 LATO43561 262 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 BUB1O43683 1085 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 NUDT21O43809 227 aaKnown RBP2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 LY6G6DO95868 133 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 PGK2P07205 417 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 EPB41P11171 864 aaKnown RBP2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 GNSP15586 552 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 RFC2P35250 354 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 RANBP1P43487 201 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 CASP9P55211 416 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 SSTP61278 116 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 PPIDQ08752 370 aaKnown RBP2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 FUT7Q11130 342 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 DPYSQ14117 519 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 MAPRE2Q15555 327 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 KDELC1Q6UW63 502 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 CWC27Q6UX04 472 aaKnown RBP2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 CCDC36Q8IYA8 594 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 C10orf67Q8IYJ2 551 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 MLKLQ8NB16 471 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms