RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 DEPDC1Q5TB30 811 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 ZNF793Q6ZN11 406 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 Q6ZSR9 355 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 SSX8Q7RTT4 187 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 TTLQ8NG68 377 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 ACTRT2Q8TDY3 377 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 UBE2FQ969M7 185 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 C1orf50Q9BV19 199 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 MS4A8Q9BY19 250 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 BPESC1Q9GZL8 116 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 PITHD1Q9GZP4 211 aaPredicted RBP8.59□□□□□ -1.03
CAPN3-216ENST00000567071 OR51B5Q9H339 312 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 NT5DC2Q9H857 520 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 AKTIPQ9H8T0 292 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 PFDN4Q9NQP4 134 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 MGAT4BQ9UQ53 548 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 ERVK-19Q9WJR5 959 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 ARL2BPQ9Y2Y0 163 aa8.59□□□□□ -1.03
CAPN3-216ENST00000567071 BIRC6Q9NR09 4857 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 LRP5LA4QPB2 252 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 M0QZ24 198 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 LSM1O15116 133 aaKnown RBP8.58□□□□□ -1.04
CAPN3-216ENST00000567071 SCAMP2O15127 329 aaKnown RBP8.58□□□□□ -1.04
CAPN3-216ENST00000567071 SEC14L5O43304 696 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 ICOSLGO75144 302 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 CLEC3AO75596 197 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 TBX6O95947 436 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-216ENST00000567071 LBPP18428 481 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 IL11P20809 199 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 TCEA1P23193 301 aaKnown RBP8.58□□□□□ -1.04
CAPN3-216ENST00000567071 CERS1P27544 350 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 SERPINB1P30740 379 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 GCH1P30793 250 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 PIK3CBP42338 1070 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 PLA2G16P53816 162 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 UBA52P62987 128 aaKnown RBP8.58□□□□□ -1.04
CAPN3-216ENST00000567071 GABPB1Q06547 395 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-216ENST00000567071 TGM3Q08188 693 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 ZNF267Q14586 743 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-216ENST00000567071 AP5B1Q2VPB7 878 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 ATP6AP1LQ52LC2 224 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 ZNF544Q6NX49 715 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 TMEM81Q6P7N7 255 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 SLC22A25Q6T423 547 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 RNF165Q6ZSG1 346 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 TRIM46Q7Z4K8 759 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 ATG4DQ86TL0 474 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-216ENST00000567071 PLCZ1Q86YW0 608 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 C1QL4Q86Z23 238 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 KISS1RQ969F8 398 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-216ENST00000567071 MUCL1Q96DR8 90 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 APIPQ96GX9 242 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 MAELQ96JY0 434 aaKnown RBP8.58□□□□□ -1.04
CAPN3-216ENST00000567071 F2RL3Q96RI0 385 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 PELOQ9BRX2 385 aaKnown RBP8.58□□□□□ -1.04
CAPN3-216ENST00000567071 CCDC28BQ9BUN5 200 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 SORBS1Q9BX66 1292 aaKnown RBP8.58□□□□□ -1.04
CAPN3-216ENST00000567071 EBPLQ9BY08 206 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 MRPL1Q9BYD6 325 aaKnown RBP8.58□□□□□ -1.04
CAPN3-216ENST00000567071 AICDAQ9GZX7 198 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 SAP130Q9H0E3 1048 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 BRF2Q9HAW0 419 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-216ENST00000567071 MRPS18CQ9Y3D5 142 aaKnown RBP8.58□□□□□ -1.04
CAPN3-216ENST00000567071 CCL27Q9Y4X3 112 aa8.58□□□□□ -1.04
CAPN3-216ENST00000567071 POLR3HQ9Y535 204 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-216ENST00000567071 B4DSR2 109 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 FOXE1O00358 373 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-216ENST00000567071 RTCAO00442 366 aaKnown RBP8.57□□□□□ -1.04
CAPN3-216ENST00000567071 SEC22BO75396 215 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 RSL1D1O76021 490 aaKnown RBP8.57□□□□□ -1.04
CAPN3-216ENST00000567071 ALDOCP09972 364 aaKnown RBP8.57□□□□□ -1.04
CAPN3-216ENST00000567071 HSD3B1P14060 373 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 NCF2P19878 526 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-216ENST00000567071 HSD3B2P26439 372 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 HNRNPH1P31943 449 aaKnown RBP8.57□□□□□ -1.04
CAPN3-216ENST00000567071 RAP1GDS1P52306 607 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 ACSM2AQ08AH3 577 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 C6orf136Q5SQH8 315 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 KHDRBS2Q5VWX1 349 aaKnown RBP8.57□□□□□ -1.04
CAPN3-216ENST00000567071 ACSM2BQ68CK6 577 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 LARP4Q71RC2 724 aaKnown RBP eCLIP8.57□□□□□ -1.04
CAPN3-216ENST00000567071 GALNT12Q8IXK2 581 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 PRR22Q8IZ63 422 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 BPIFB2Q8N4F0 458 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 C1orf52Q8N6N3 182 aaKnown RBP8.57□□□□□ -1.04
CAPN3-216ENST00000567071 GBP7Q8N8V2 638 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-216ENST00000567071 ANKS4BQ8N8V4 417 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 FNDC5Q8NAU1 212 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 OR2L5Q8NG80 312 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 CEP70Q8NHQ1 597 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 CDC26Q8NHZ8 85 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 PPWD1Q96BP3 646 aaKnown RBP8.57□□□□□ -1.04
CAPN3-216ENST00000567071 MS4A6EQ96DS6 147 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 CMTM7Q96FZ5 175 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 PPP3R2Q96LZ3 170 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 SERPINI1Q99574 410 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 CCT7Q99832 543 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 ROGDIQ9GZN7 287 aa8.57□□□□□ -1.04
CAPN3-216ENST00000567071 NMUR2Q9GZQ4 415 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms