RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 GPR119Q8TDV5 335 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 HSD17B8Q92506 261 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 ARL8AQ96BM9 186 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 CHMP6Q96FZ7 201 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 MRGPRX4Q96LA9 322 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 KLHDC3Q9BQ90 382 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 GPATCH2Q9NW75 528 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 KLHL13Q9P2N7 655 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 DTNAQ9Y4J8 743 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 ARID1AO14497 2285 aa13.36□□□□□ -0.27
RNF40-209ENST00000566703 TLDC2A0PJX2 215 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 DUXAA6NLW8 204 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 NPIPB9F8W1W9 429 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 EIF4E2O60573 245 aaKnown RBP13.35□□□□□ -0.27
RNF40-209ENST00000566703 GCM2O75603 506 aaPredicted RBP13.35□□□□□ -0.27
RNF40-209ENST00000566703 NTN1O95631 604 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 NUDT14O95848 222 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 PLAUP00749 431 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 PRKCAP17252 672 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 EFNA1P20827 205 aaPredicted RBP13.35□□□□□ -0.27
RNF40-209ENST00000566703 SHC1P29353 583 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 RAC3P60763 192 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 P2RY6Q15077 328 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 TMEM176BQ3YBM2 270 aaPredicted RBP13.35□□□□□ -0.27
RNF40-209ENST00000566703 C6orf136Q5SQH8 315 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 DCST2Q5T1A1 773 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 CBLN3Q6UW01 205 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 TFAP2EQ6VUC0 442 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 DNAJC14Q6Y2X3 702 aaPredicted RBP13.35□□□□□ -0.27
RNF40-209ENST00000566703 TOR1AIP2Q8NFQ8 470 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 SFXN5Q8TD22 340 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 ABHD3Q8WU67 409 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 OTUB1Q96FW1 271 aaPredicted RBP13.35□□□□□ -0.27
RNF40-209ENST00000566703 BHLHE41Q9C0J9 482 aaPredicted RBP13.35□□□□□ -0.27
RNF40-209ENST00000566703 C12orf49Q9H741 205 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 CXorf36Q9H7Y0 433 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 L2HGDHQ9H9P8 463 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 CARD8Q9Y2G2 431 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 DSCAMO60469 2012 aa13.35□□□□□ -0.27
RNF40-209ENST00000566703 RAI1Q7Z5J4 1906 aaPredicted RBP13.35□□□□□ -0.27
RNF40-209ENST00000566703 TRIM64A6NGJ6 449 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 TRIM64BA6NI03 449 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 TMEM233B4DJY2 109 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 ETV2O00321 342 aaPredicted RBP13.34□□□□□ -0.27
RNF40-209ENST00000566703 SMAD7O15105 426 aaKnown RBP13.34□□□□□ -0.27
RNF40-209ENST00000566703 SLU7O95391 586 aaKnown RBP13.34□□□□□ -0.27
RNF40-209ENST00000566703 C21orf58P58505 322 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 SELENBP1Q13228 472 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 TP53BP2Q13625 1128 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 SPDYE7PQ495Y7 208 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 IL23RQ5VWK5 629 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 FCRLAQ7L513 359 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 SSX8Q7RTT4 187 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 NUFIP2Q7Z417 695 aaKnown RBP13.34□□□□□ -0.27
RNF40-209ENST00000566703 TUSC5Q8IXB3 177 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 RIMKLAQ8IXN7 391 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 FNDC5Q8NAU1 212 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 OR5W2Q8NH69 310 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 ZFP90Q8TF47 636 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 AKAP1Q92667 903 aaKnown RBP eCLIP13.34□□□□□ -0.27
RNF40-209ENST00000566703 S100PBPQ96BU1 408 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 SDF2Q99470 211 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 SRXN1Q9BYN0 137 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 ESRP2Q9H6T0 727 aaKnown RBP13.34□□□□□ -0.27
RNF40-209ENST00000566703 BCO1Q9HAY6 547 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 KCNE3Q9Y6H6 103 aa13.34□□□□□ -0.27
RNF40-209ENST00000566703 FLNAP21333 2647 aaKnown RBP13.34□□□□□ -0.27
RNF40-209ENST00000566703 OVOL3O00110 214 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 ZNF264O43296 627 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 OIP5O43482 229 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 DNAJA2O60884 412 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 C6orf47O95873 294 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 AK1P00568 194 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 NUDT17P0C025 328 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 IL32P24001 234 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 ATP5J2P56134 94 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 RPS4XP62701 263 aaKnown RBP13.33□□□□□ -0.28
RNF40-209ENST00000566703 ZNF844Q08AG5 666 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 MAD2L1Q13257 205 aaPredicted RBP13.33□□□□□ -0.28
RNF40-209ENST00000566703 ITGADQ13349 1161 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 PTGR1Q14914 329 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 ETFDHQ16134 617 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 SMU1Q2TAY7 513 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 NCMAPQ5T1S8 102 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.33□□□□□ -0.28
RNF40-209ENST00000566703 LRRN4CLQ8ND94 238 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 TRMT61AQ96FX7 289 aaKnown RBP13.33□□□□□ -0.28
RNF40-209ENST00000566703 C3orf30Q96M34 536 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 ZIM3Q96PE6 472 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 OR7D2Q96RA2 312 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 MECRQ9BV79 373 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 ROPN1BQ9BZX4 212 aaPredicted RBP13.33□□□□□ -0.28
RNF40-209ENST00000566703 NMUR2Q9GZQ4 415 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 ROPN1Q9HAT0 212 aaPredicted RBP13.33□□□□□ -0.28
RNF40-209ENST00000566703 KLHL9Q9P2J3 617 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 SLC17A7Q9P2U7 560 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 LGALS13Q9UHV8 139 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 ZDHHC2Q9UIJ5 367 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 RNF115Q9Y4L5 304 aa13.33□□□□□ -0.28
RNF40-209ENST00000566703 NPIPA5A0A0B4J1W7 369 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms