RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 TUBBP07437 444 aa18.04■□□□□ 0.48
CLN6-207ENST00000566347 SFTPDP35247 375 aa18.04■□□□□ 0.48
CLN6-207ENST00000566347 CBLN3Q6UW01 205 aa18.04■□□□□ 0.48
CLN6-207ENST00000566347 BEND4Q6ZU67 534 aa18.04■□□□□ 0.48
CLN6-207ENST00000566347 ZNF614Q8N883 585 aa18.04■□□□□ 0.48
CLN6-207ENST00000566347 PIGTQ969N2 578 aa18.04■□□□□ 0.48
CLN6-207ENST00000566347 CPNE4Q96A23 557 aaPredicted RBP18.04■□□□□ 0.48
CLN6-207ENST00000566347 SDF2Q99470 211 aa18.04■□□□□ 0.48
CLN6-207ENST00000566347 NMUR2Q9GZQ4 415 aa18.04■□□□□ 0.48
CLN6-207ENST00000566347 AKTIPQ9H8T0 292 aa18.04■□□□□ 0.48
CLN6-207ENST00000566347 DLL4Q9NR61 685 aa18.04■□□□□ 0.48
CLN6-207ENST00000566347 PCDHGB4Q9UN71 923 aa18.04■□□□□ 0.48
CLN6-207ENST00000566347 ZNF195O14628 629 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 OIP5O43482 229 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 EIF4E2O60573 245 aaKnown RBP18.03■□□□□ 0.48
CLN6-207ENST00000566347 FPR1P21462 350 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 MATN1P21941 496 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 HOXC12P31275 282 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 RPL14P50914 215 aaKnown RBP18.03■□□□□ 0.48
CLN6-207ENST00000566347 ZNF239Q16600 458 aaKnown RBP18.03■□□□□ 0.48
CLN6-207ENST00000566347 OR4F3Q6IEY1 312 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 C6orf120Q7Z4R8 191 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 CLECL1Q8IZS7 167 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 TOR1AIP2Q8NFQ8 470 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 OR8J2Q8NGG1 315 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 OR5D16Q8NGK9 328 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 FBXO27Q8NI29 283 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 GPR119Q8TDV5 335 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 ZC3HAV1LQ96H79 300 aaKnown RBP18.03■□□□□ 0.48
CLN6-207ENST00000566347 SLC35G5Q96KT7 338 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 MARK4Q96L34 752 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 MRGPRX4Q96LA9 322 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 PPP1R36Q96LQ0 422 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 PIP5K1AQ99755 562 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 PARD6BQ9BYG5 372 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 DPY30Q9C005 99 aa18.03■□□□□ 0.48
CLN6-207ENST00000566347 NIPBLQ6KC79 2804 aaeCLIP18.02■□□□□ 0.48
CLN6-207ENST00000566347 RNF103-CHMP3A0A140T963 221 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 ZNF264O43296 627 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 DIAPH2O60879 1101 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 STX11O75558 287 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 DHRS4L1P0CG22 281 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 UBL4AP11441 157 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 PRKCAP17252 672 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 AGTR1P30556 359 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 SLC1A6P48664 564 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 RPS26P62854 115 aaKnown RBP18.02■□□□□ 0.48
CLN6-207ENST00000566347 RNPS1Q15287 305 aaKnown RBP18.02■□□□□ 0.48
CLN6-207ENST00000566347 SHEQ5VZ18 495 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 ANKRD34AQ69YU3 496 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 STAC2Q6ZMT1 411 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 CXorf67Q86X51 503 aaPredicted RBP18.02■□□□□ 0.48
CLN6-207ENST00000566347 LRRC34Q8IZ02 419 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 TMCO5AQ8N6Q1 288 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 WFDC11Q8NEX6 87 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 VPS37AQ8NEZ2 397 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 OR4A15Q8NGL6 344 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 OR5W2Q8NH69 310 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 RNF128Q8TEB7 428 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 ARL8AQ96BM9 186 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 ARSGQ96EG1 525 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 OR10A4Q9H209 315 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 ZNF395Q9H8N7 513 aaPredicted RBP18.02■□□□□ 0.48
CLN6-207ENST00000566347 GP6Q9HCN6 339 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 EXD2Q9NVH0 621 aa18.02■□□□□ 0.48
CLN6-207ENST00000566347 ARHGEF9O43307 516 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 AGR2O95994 175 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 SHC1P29353 583 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 RNF144AP50876 292 aaPredicted RBP18.01■□□□□ 0.47
CLN6-207ENST00000566347 NKX6-1P78426 367 aaPredicted RBP18.01■□□□□ 0.47
CLN6-207ENST00000566347 SELENBP1Q13228 472 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 CBFBQ13951 182 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 ACKR1Q16570 336 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 ARHGAP11BQ3KRB8 267 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 TMEM176BQ3YBM2 270 aaPredicted RBP18.01■□□□□ 0.47
CLN6-207ENST00000566347 TMEM201Q5SNT2 666 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 PDZK1Q5T2W1 519 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 ANXA8L1Q5VT79 327 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 C20orf204Q6ZNR8 217 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 CROCCP2Q86T23 111 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 ZFP90Q8TF47 636 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 ROBO4Q8WZ75 1007 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 SORT1Q99523 831 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 CENPHQ9H3R5 247 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 SERHL2Q9H4I8 314 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 UBTD1Q9HAC8 227 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 HAO1Q9UJM8 370 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 VPS13CQ709C8 3753 aa18.01■□□□□ 0.47
CLN6-207ENST00000566347 PRSS51A0A1B0GVH4 220 aa18■□□□□ 0.47
CLN6-207ENST00000566347 SERINC4A6NH21 518 aa18■□□□□ 0.47
CLN6-207ENST00000566347 EFNA2O43921 213 aa18■□□□□ 0.47
CLN6-207ENST00000566347 SMPD2O60906 423 aa18■□□□□ 0.47
CLN6-207ENST00000566347 NTN1O95631 604 aa18■□□□□ 0.47
CLN6-207ENST00000566347 NID1P14543 1247 aa18■□□□□ 0.47
CLN6-207ENST00000566347 CCR4P51679 360 aa18■□□□□ 0.47
CLN6-207ENST00000566347 CLNS1AP54105 237 aaKnown RBP18■□□□□ 0.47
CLN6-207ENST00000566347 GPR68Q15743 365 aa18■□□□□ 0.47
CLN6-207ENST00000566347 TOMM34Q15785 309 aaPredicted RBP18■□□□□ 0.47
CLN6-207ENST00000566347 ZNF141Q15928 474 aa18■□□□□ 0.47
CLN6-207ENST00000566347 DPY19L1Q2PZI1 675 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms