RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 RPS26P62854 115 aaKnown RBP16.36■□□□□ 0.21
USB1-213ENST00000566292 NKX6-1P78426 367 aaPredicted RBP16.36■□□□□ 0.21
USB1-213ENST00000566292 MAD2L1Q13257 205 aaPredicted RBP16.36■□□□□ 0.21
USB1-213ENST00000566292 PDCD2Q16342 344 aaPredicted RBP16.36■□□□□ 0.21
USB1-213ENST00000566292 ZNF239Q16600 458 aaKnown RBP16.36■□□□□ 0.21
USB1-213ENST00000566292 PGS1Q32NB8 556 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 PDSS1Q5T2R2 415 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 CLECL1Q8IZS7 167 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 CLEC4FQ8N1N0 589 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 MREGQ8N565 214 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 ROBO4Q8WZ75 1007 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 PPP1R36Q96LQ0 422 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 SDF2Q99470 211 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 SRXN1Q9BYN0 137 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 C20orf27Q9GZN8 174 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 UBTD1Q9HAC8 227 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 NOP53Q9NZM5 478 aaKnown RBP16.36■□□□□ 0.21
USB1-213ENST00000566292 DTNAQ9Y4J8 743 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 ACTL7BQ9Y614 415 aa16.36■□□□□ 0.21
USB1-213ENST00000566292 ZNF195O14628 629 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 KLF4O43474 513 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 SOX30O94993 753 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 SERPINE1P05121 402 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 TUBBP07437 444 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 PRKCAP17252 672 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 HOXB4P17483 251 aaPredicted RBP16.35■□□□□ 0.21
USB1-213ENST00000566292 ADH6P28332 368 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 ZNF844Q08AG5 666 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 CHI3L2Q15782 390 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 ACKR1Q16570 336 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 SMU1Q2TAY7 513 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 KRTAP21-3Q3LHN1 58 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 KRT71Q3SY84 523 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 OR4F3Q6IEY1 312 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 ZNF614Q8N883 585 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 PPP1R14CQ8TAE6 165 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 RNF128Q8TEB7 428 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 ZIM3Q96PE6 472 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 PIP5K1AQ99755 562 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 C12orf49Q9H741 205 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 COQ10BQ9H8M1 238 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 AKTIPQ9H8T0 292 aa16.35■□□□□ 0.21
USB1-213ENST00000566292 GPC6Q9Y625 555 aaPredicted RBP16.35■□□□□ 0.21
USB1-213ENST00000566292 H3BNH8 94 aa16.34■□□□□ 0.21
USB1-213ENST00000566292 GTPBP1O00178 669 aaKnown RBP16.34■□□□□ 0.21
USB1-213ENST00000566292 NTN1O95631 604 aa16.34■□□□□ 0.21
USB1-213ENST00000566292 MATN1P21941 496 aa16.34■□□□□ 0.21
USB1-213ENST00000566292 ABCE1P61221 599 aaKnown RBP16.34■□□□□ 0.21
USB1-213ENST00000566292 PDZK1Q5T2W1 519 aa16.34■□□□□ 0.21
USB1-213ENST00000566292 SHEQ5VZ18 495 aa16.34■□□□□ 0.21
USB1-213ENST00000566292 BEND4Q6ZU67 534 aa16.34■□□□□ 0.21
USB1-213ENST00000566292 OLIG3Q7RTU3 272 aa16.34■□□□□ 0.21
USB1-213ENST00000566292 C6orf120Q7Z4R8 191 aa16.34■□□□□ 0.21
USB1-213ENST00000566292 ABHD3Q8WU67 409 aa16.34■□□□□ 0.21
USB1-213ENST00000566292 PIGTQ969N2 578 aa16.34■□□□□ 0.21
USB1-213ENST00000566292 SMR3AQ99954 134 aa16.34■□□□□ 0.21
USB1-213ENST00000566292 KCNE5Q9UJ90 142 aa16.34■□□□□ 0.21
USB1-213ENST00000566292 NSD1Q96L73 2696 aaPredicted RBP16.33■□□□□ 0.21
USB1-213ENST00000566292 CENPVL1A0A0U1RR11 272 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.33■□□□□ 0.2
USB1-213ENST00000566292 ESPNB1AK53 854 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 RNASET2O00584 256 aaKnown RBP16.33■□□□□ 0.2
USB1-213ENST00000566292 BIRC5O15392 142 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 RGS16O15492 202 aaPredicted RBP16.33■□□□□ 0.2
USB1-213ENST00000566292 SMPD2O60906 423 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 SCN2BO60939 215 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 DHRS4L1P0CG22 281 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 PPP3CBP16298 524 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 PHC1P78364 1004 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 TMEM176BQ3YBM2 270 aaPredicted RBP16.33■□□□□ 0.2
USB1-213ENST00000566292 SLC25A53Q5H9E4 307 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 GTF2IRD2BQ6EKJ0 949 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 BHLHB9Q6PI77 547 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 NUFIP2Q7Z417 695 aaKnown RBP16.33■□□□□ 0.2
USB1-213ENST00000566292 GTF2IRD2Q86UP8 949 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 LRRC75A-AS1Q8N1F1 130 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 OR5W2Q8NH69 310 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 RFWD2Q8NHY2 731 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 CPNE4Q96A23 557 aaPredicted RBP16.33■□□□□ 0.2
USB1-213ENST00000566292 ARSGQ96EG1 525 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 C18orf12Q96KH6 178 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 SLC35G5Q96KT7 338 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 SORT1Q99523 831 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 CCL19Q99731 98 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 NMUR2Q9GZQ4 415 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 SSU72Q9NP77 194 aaKnown RBP16.33■□□□□ 0.2
USB1-213ENST00000566292 RAP2CQ9Y3L5 183 aa16.33■□□□□ 0.2
USB1-213ENST00000566292 RNF103-CHMP3A0A140T963 221 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 SERINC4A6NH21 518 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 ETV2O00321 342 aaPredicted RBP16.32■□□□□ 0.2
USB1-213ENST00000566292 ZNF264O43296 627 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 EIF4E2O60573 245 aaKnown RBP16.32■□□□□ 0.2
USB1-213ENST00000566292 FCMRO60667 390 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 UBL4AP11441 157 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 FPR1P21462 350 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 CASP9P55211 416 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 MPP2Q14168 576 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 GPR68Q15743 365 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 ZNF141Q15928 474 aa16.32■□□□□ 0.2
USB1-213ENST00000566292 BEX5Q5H9J7 111 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms