RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 LHX1P48742 406 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 DUSP3P51452 185 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 SCAPQ12770 1279 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 KCNAB1Q14722 419 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 TRAM2Q15035 370 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 CHRNA6Q15825 494 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 TMEM240Q5SV17 173 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 MOB3CQ70IA8 216 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 FAM122BQ7Z309 247 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 FBXO39Q8N4B4 442 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 C1orf127Q8N9H9 656 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 RELL2Q8NC24 303 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 RHEBL1Q8TAI7 183 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 STOML3Q8TAV4 291 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 SH3RF2Q8TEC5 729 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 WFIKKN2Q8TEU8 576 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 NT5C3BQ969T7 300 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 CPNE4Q96A23 557 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 OR5B12Q96R08 314 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 DPY30Q9C005 99 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 CENPMQ9NSP4 180 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 CLN6Q9NWW5 311 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 TXNL4BQ9NX01 149 aaKnown RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 ZNF629Q9UEG4 869 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 NUBP2Q9Y5Y2 271 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 SHISA3A0PJX4 238 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 M0QZK8 103 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 GPR37O15354 613 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 TLX2O43763 284 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 B3GALT4O96024 378 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 HLA-DQA2P01906 255 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 RCC1P18754 421 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 NPBWR1P48145 328 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 DNASE1L1P49184 302 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 MLLT11Q13015 90 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 PIN1Q13526 163 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 SPHARQ15513 63 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 RNF212Q495C1 297 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 GCNT6Q5T4J0 391 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ZNF660Q6AZW8 331 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 SMIM5Q71RC9 77 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 MOB1BQ7L9L4 216 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 PXT1Q8NFP0 134 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ARRDC2Q8TBH0 407 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ELP5Q8TE02 316 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 C16orf78Q8WTQ4 265 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 DERL2Q9GZP9 239 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 PXMP2Q9NR77 195 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 LATS2Q9NRM7 1088 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 CLEC2DQ9UHP7 191 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 EXOSC1Q9Y3B2 195 aaKnown RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 A0A1W2PQL4 384 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 TMEM129A0AVI4 362 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 APBB3O95704 486 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ZNF682O95780 498 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 SCGB1D1O95968 90 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 MT-CYBP00156 380 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 VPREB1P12018 145 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 RPA2P15927 270 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 PBX3P40426 434 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 CASP6P55212 293 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ERVFC1P60507 584 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 HSD11B2P80365 405 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 GSG1Q2KHT4 349 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 FBXO47Q5MNV8 452 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 RAET1LQ5VY80 246 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 C22orf42Q6IC83 251 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 VHLLQ6RSH7 139 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ABHD12BQ7Z5M8 362 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 VTCN1Q7Z7D3 282 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 SYT14Q8NB59 555 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 THEM6Q8WUY1 208 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 TMEM41AQ96HV5 264 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 HS6ST2Q96MM7 605 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 KCNC2Q96PR1 638 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 SEMA4BQ9NPR2 832 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 RNF146Q9NTX7 359 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 A4GNTQ9UNA3 340 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 MYO5AQ9Y4I1 1855 aaKnown RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 IGKV6D-21A0A0A0MT36 114 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 IGKV6-21A0A0C4DH24 114 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 OR6C74A6NCV1 312 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 SOX15O60248 233 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ZIC2O95409 532 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 DCNP07585 359 aaKnown RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 TSPAN7P41732 249 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 WASP42768 502 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 CCR9P51686 369 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 GLT8D1Q68CQ7 371 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 RAET1GQ6H3X3 334 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 HFE2Q6ZVN8 426 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 MAMDC2Q7Z304 686 aaPredicted RBP2.74□□□□□ -1.97
CHD9-218ENST00000566029 OR2W3Q7Z3T1 314 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 SIAH3Q8IW03 269 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 TMEM156Q8N614 296 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 ZNF439Q8NDP4 499 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 OR10H5Q8NGA6 315 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 GNPDA2Q8TDQ7 276 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 XAGE5Q8WWM1 108 aa2.74□□□□□ -1.97
CHD9-218ENST00000566029 SLC39A7Q92504 469 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms