RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 KCNK17Q96T54 332 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 PAIP2Q9BPZ3 127 aaKnown RBP11.31□□□□□ -0.6
RNF40-208ENST00000565995 C19orf24Q9BVV8 132 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 MED17Q9NVC6 651 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 NTMQ9P121 344 aa11.31□□□□□ -0.6
RNF40-208ENST00000565995 A0A1W2PQD3 144 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 GXYLT2A0PJZ3 443 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 FAM234BA2RU67 622 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 NDUFB5O43674 189 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 EFNA2O43921 213 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 DLX3O60479 287 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 PRKD3O94806 890 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 PGM3O95394 542 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 OXSR1O95747 527 aaPredicted RBP11.3□□□□□ -0.6
RNF40-208ENST00000565995 OPN1LWP04000 364 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 ANXA4P09525 319 aaPredicted RBP11.3□□□□□ -0.6
RNF40-208ENST00000565995 ME2P23368 584 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 ELK4P28324 431 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 GABRA3P34903 492 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 EIF1P41567 113 aaKnown RBP11.3□□□□□ -0.6
RNF40-208ENST00000565995 IRX1P78414 480 aaPredicted RBP11.3□□□□□ -0.6
RNF40-208ENST00000565995 ZNF763Q0D2J5 394 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 C2orf80Q0P641 193 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 CCDC153Q494R4 210 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 UNC50Q53HI1 259 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 HHATQ5VTY9 493 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 CYB5R2Q6BCY4 276 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 BHLHA15Q7RTS1 189 aaPredicted RBP11.3□□□□□ -0.6
RNF40-208ENST00000565995 P2RY8Q86VZ1 359 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 MISPQ8IVT2 679 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 LILRA2Q8N149 483 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 ARFGAP2Q8N6H7 521 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 FAM76AQ8TAV0 307 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 METTL6Q8TCB7 284 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 ABHD3Q8WU67 409 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 DYDC1Q8WWB3 177 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 SLC9A6Q92581 669 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 PROX1Q92786 737 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 ADAD1Q96M93 576 aaKnown RBP11.3□□□□□ -0.6
RNF40-208ENST00000565995 KLHL15Q96M94 604 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 C12orf65Q9H3J6 166 aaKnown RBP11.3□□□□□ -0.6
RNF40-208ENST00000565995 BCO1Q9HAY6 547 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 TIGARQ9NQ88 270 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 DDX18Q9NVP1 670 aaKnown RBP11.3□□□□□ -0.6
RNF40-208ENST00000565995 TMEM216Q9P0N5 145 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 SLC17A7Q9P2U7 560 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 MID2Q9UJV3 735 aa11.3□□□□□ -0.6
RNF40-208ENST00000565995 TM9SF1O15321 606 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 TYROBPO43914 113 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 MYL2P10916 166 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 NEFHP12036 1026 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 TAC1P20366 129 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 TTKP33981 857 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 OR3A2P47893 321 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 ZNF41P51814 821 aaPredicted RBP11.29□□□□□ -0.6
RNF40-208ENST00000565995 CASP9P55211 416 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 C21orf58P58505 322 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 PPA1Q15181 289 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 EXOSC6Q5RKV6 272 aaKnown RBP11.29□□□□□ -0.6
RNF40-208ENST00000565995 TIMM23BQ5SRD1 257 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 ZNF678Q5SXM1 525 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 ALKBH2Q6NS38 261 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 CLEC2AQ6UVW9 174 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 Q6ZSR9 355 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 SLC43A2Q8N370 569 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 OR6Y1Q8NGX8 325 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 PIK3R3Q92569 461 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 REXO5Q96IC2 774 aaKnown RBP11.29□□□□□ -0.6
RNF40-208ENST00000565995 SRXN1Q9BYN0 137 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 SHARPINQ9H0F6 387 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 MYNNQ9NPC7 610 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 CBLN4Q9NTU7 201 aa11.29□□□□□ -0.6
RNF40-208ENST00000565995 ING1Q9UK53 422 aaPredicted RBP11.29□□□□□ -0.6
RNF40-208ENST00000565995 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 H7C417 338 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 RGS14O43566 566 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 GMFGO60234 142 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 PLIN3O60664 434 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 NTN1O95631 604 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 PROCP04070 461 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 ENO1P06733 434 aaKnown RBP11.28□□□□□ -0.6
RNF40-208ENST00000565995 PRPS2P11908 318 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 COX5AP20674 150 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 IMPDH1P20839 514 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 SHC1P29353 583 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 NTSP30990 170 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 HTR6P50406 440 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 NUDT6P53370 316 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 VPS26BQ4G0F5 336 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 GPRIN3Q6ZVF9 776 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 FCRLAQ7L513 359 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 CDRT4Q8N9R6 151 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 GPR151Q8TDV0 419 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 C10orf105Q8TEF2 133 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 GIMAP5Q96F15 307 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 ZNF764Q96H86 408 aaPredicted RBP11.28□□□□□ -0.6
RNF40-208ENST00000565995 DHRS9Q9BPW9 319 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 KLHDC3Q9BQ90 382 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 EBPLQ9BY08 206 aa11.28□□□□□ -0.6
RNF40-208ENST00000565995 UBQLN4Q9NRR5 601 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms