RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 ENO4A6NNW6 628 aa23.59■■□□□ 1.37
NME3-208ENST00000565379 GNB5O14775 395 aa23.59■■□□□ 1.37
NME3-208ENST00000565379 GMNNO75496 209 aa23.59■■□□□ 1.37
NME3-208ENST00000565379 ALDH6A1Q02252 535 aaKnown RBP23.59■■□□□ 1.37
NME3-208ENST00000565379 CD226Q15762 336 aa23.59■■□□□ 1.37
NME3-208ENST00000565379 EIPR1Q53HC9 387 aa23.59■■□□□ 1.37
NME3-208ENST00000565379 ZNF311Q5JNZ3 666 aa23.59■■□□□ 1.37
NME3-208ENST00000565379 ARMC8Q8IUR7 673 aa23.59■■□□□ 1.37
NME3-208ENST00000565379 FAM109AQ8N4B1 249 aa23.59■■□□□ 1.37
NME3-208ENST00000565379 FADS6Q8N9I5 356 aa23.59■■□□□ 1.37
NME3-208ENST00000565379 B4GALNT2Q8NHY0 566 aa23.59■■□□□ 1.37
NME3-208ENST00000565379 SLC7A6OSQ96CW6 309 aaPredicted RBP23.59■■□□□ 1.37
NME3-208ENST00000565379 LAT2Q9GZY6 243 aa23.59■■□□□ 1.37
NME3-208ENST00000565379 EXOSC3Q9NQT5 275 aaKnown RBP23.59■■□□□ 1.37
NME3-208ENST00000565379 SH3BGRL2Q9UJC5 107 aa23.59■■□□□ 1.37
NME3-208ENST00000565379 ZNF443Q9Y2A4 671 aaPredicted RBP23.59■■□□□ 1.37
NME3-208ENST00000565379 MRPS18CQ9Y3D5 142 aaKnown RBP23.59■■□□□ 1.37
NME3-208ENST00000565379 C2orf72A6NCS6 295 aa23.58■■□□□ 1.37
NME3-208ENST00000565379 M0QX08 132 aa23.58■■□□□ 1.37
NME3-208ENST00000565379 HCRTR2O43614 444 aa23.58■■□□□ 1.37
NME3-208ENST00000565379 PGM1P36871 562 aa23.58■■□□□ 1.37
NME3-208ENST00000565379 DHRS4L2Q6PKH6 230 aa23.58■■□□□ 1.37
NME3-208ENST00000565379 GRAMD2AQ8IUY3 354 aa23.58■■□□□ 1.37
NME3-208ENST00000565379 ZNF440Q8IYI8 595 aa23.58■■□□□ 1.37
NME3-208ENST00000565379 GATSQ8NAP1 163 aa23.58■■□□□ 1.37
NME3-208ENST00000565379 FAM71CQ8NEG0 241 aa23.58■■□□□ 1.37
NME3-208ENST00000565379 OR2M3Q8NG83 312 aa23.58■■□□□ 1.37
NME3-208ENST00000565379 SLC35B4Q969S0 331 aa23.58■■□□□ 1.37
NME3-208ENST00000565379 GNRHR2Q96P88 292 aa23.58■■□□□ 1.37
NME3-208ENST00000565379 UBQLN3Q9H347 655 aa23.58■■□□□ 1.37
NME3-208ENST00000565379 ZNF703Q9H7S9 590 aaPredicted RBP23.58■■□□□ 1.37
NME3-208ENST00000565379 CENPVL1A0A0U1RR11 272 aa23.57■■□□□ 1.36
NME3-208ENST00000565379 TFECO14948 347 aaPredicted RBP23.57■■□□□ 1.36
NME3-208ENST00000565379 MFN2O95140 757 aa23.57■■□□□ 1.36
NME3-208ENST00000565379 AQP1P29972 269 aa23.57■■□□□ 1.36
NME3-208ENST00000565379 P2RX1P51575 399 aa23.57■■□□□ 1.36
NME3-208ENST00000565379 DSCR4P56555 118 aaPredicted RBP23.57■■□□□ 1.36
NME3-208ENST00000565379 PER3P56645 1201 aa23.57■■□□□ 1.36
NME3-208ENST00000565379 EEF1A1P68104 462 aaKnown RBP23.57■■□□□ 1.36
NME3-208ENST00000565379 FXNQ16595 210 aa23.57■■□□□ 1.36
NME3-208ENST00000565379 RNFT1Q5M7Z0 435 aa23.57■■□□□ 1.36
NME3-208ENST00000565379 TMEM251Q8N6I4 163 aa23.57■■□□□ 1.36
NME3-208ENST00000565379 SLC26A7Q8TE54 656 aa23.57■■□□□ 1.36
NME3-208ENST00000565379 PINK1Q9BXM7 581 aa23.57■■□□□ 1.36
NME3-208ENST00000565379 ZDHHC11Q9H8X9 412 aa23.57■■□□□ 1.36
NME3-208ENST00000565379 TRGV8A0A0C4DH27 118 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 CDHR4A6H8M9 788 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 CXCR6O00574 342 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 C8BP07358 591 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 GDF1P27539 372 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 SRD5A2P31213 254 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 KDELR2P33947 212 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 SLC6A8P48029 635 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 BNIP2Q12982 314 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 MRPL2Q5T653 305 aaKnown RBP23.56■■□□□ 1.36
NME3-208ENST00000565379 VRK2Q86Y07 508 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 RNF145Q96MT1 663 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 MUC13Q9H3R2 512 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 DSN1Q9H410 356 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 ACKR4Q9NPB9 350 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 KLHL28Q9NXS3 571 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 MED11Q9P086 117 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 MAGEL2Q9UJ55 1249 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 SLC13A4Q9UKG4 626 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 USP22Q9UPT9 525 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 CARD8Q9Y2G2 431 aa23.56■■□□□ 1.36
NME3-208ENST00000565379 A0A087WZY1 265 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 FAM166BA8MTA8 275 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 FAM47E-STBD1D6RA91 191 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 NPIPA5E9PKD4 350 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 GCM2O75603 506 aaPredicted RBP23.55■■□□□ 1.36
NME3-208ENST00000565379 GGT1P19440 569 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 RFC3P40938 356 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 ZNF117Q03924 483 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 SKP2Q13309 424 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 CBFBQ13951 182 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 SLC10A1Q14973 349 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 GLYR1Q49A26 553 aaPredicted RBP23.55■■□□□ 1.36
NME3-208ENST00000565379 KRTCAP3Q53RY4 240 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 OR5M10Q6IEU7 315 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 ZNF836Q6ZNA1 936 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 OR5W2Q8NH69 310 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 ARSGQ96EG1 525 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 ICAM5Q9UMF0 924 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 NPIPA1Q9UND3 350 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 NINQ8N4C6 2090 aa23.55■■□□□ 1.36
NME3-208ENST00000565379 SYT5O00445 386 aa23.54■■□□□ 1.36
NME3-208ENST00000565379 DNAJC8O75937 253 aaPredicted RBP23.54■■□□□ 1.36
NME3-208ENST00000565379 HPNP05981 417 aa23.54■■□□□ 1.36
NME3-208ENST00000565379 RFPL3SP0C7P2 107 aa23.54■■□□□ 1.36
NME3-208ENST00000565379 UBTFL6P0CB48 400 aaPredicted RBP23.54■■□□□ 1.36
NME3-208ENST00000565379 UQCRBP14927 111 aa23.54■■□□□ 1.36
NME3-208ENST00000565379 ME2P23368 584 aa23.54■■□□□ 1.36
NME3-208ENST00000565379 HSF1Q00613 529 aa23.54■■□□□ 1.36
NME3-208ENST00000565379 CEACAM7Q14002 265 aa23.54■■□□□ 1.36
NME3-208ENST00000565379 ZNF550Q7Z398 422 aa23.54■■□□□ 1.36
NME3-208ENST00000565379 HMGN2P46Q86SG4 172 aa23.54■■□□□ 1.36
NME3-208ENST00000565379 SIAH3Q8IW03 269 aa23.54■■□□□ 1.36
NME3-208ENST00000565379 RNF148Q8N7C7 305 aa23.54■■□□□ 1.36
NME3-208ENST00000565379 FIG4Q92562 907 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms