RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ME2P23368 584 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 ELK4P28324 431 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 ALDH3A1P30838 453 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 CCT3P49368 545 aaKnown RBP7.63□□□□□ -1.19
CAPN3-213ENST00000565173 RNF144AP50876 292 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-213ENST00000565173 P2RX1P51575 399 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 PTGR1Q14914 329 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 RNPS1Q15287 305 aaKnown RBP7.63□□□□□ -1.19
CAPN3-213ENST00000565173 TSC22D1Q15714 1073 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 XKR7Q5GH72 579 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 SFRP5Q5T4F7 317 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 CDC73Q6P1J9 531 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 R3HCC1LQ7Z5L2 792 aaKnown RBP7.63□□□□□ -1.19
CAPN3-213ENST00000565173 ATG4DQ86TL0 474 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-213ENST00000565173 STK32CQ86UX6 486 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 TUSC5Q8IXB3 177 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 RIMKLAQ8IXN7 391 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 BANPQ8N9N5 519 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 STEAP2Q8NFT2 490 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 FBXO27Q8NI29 283 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 PHOSPHO1Q8TCT1 267 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 GPR119Q8TDV5 335 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 TMEM171Q8WVE6 324 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 TWIST2Q8WVJ9 160 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 UBLCP1Q8WVY7 318 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-213ENST00000565173 JADE3Q92613 823 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 CPNE4Q96A23 557 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-213ENST00000565173 S100PBPQ96BU1 408 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 COQ8BQ96D53 544 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 MECRQ9BV79 373 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 HDHD5Q9BXW7 423 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 ACTRT3Q9BYD9 372 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 HOXD1Q9GZZ0 328 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 CXorf56Q9H5V9 222 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 CXorf36Q9H7Y0 433 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 COQ10BQ9H8M1 238 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 ANKZF1Q9H8Y5 726 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 PPCSQ9HAB8 311 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 GP6Q9HCN6 339 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 ZCCHC3Q9NUD5 404 aaKnown RBP7.63□□□□□ -1.19
CAPN3-213ENST00000565173 MKS1Q9NXB0 559 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 KLHL13Q9P2N7 655 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.63□□□□□ -1.19
CAPN3-213ENST00000565173 ACTL7BQ9Y614 415 aa7.63□□□□□ -1.19
CAPN3-213ENST00000565173 V9GYY5 206 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-213ENST00000565173 FREM1Q5H8C1 2179 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 TMEM114B3SHH9 223 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 DNAJA2O60884 412 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 PEX11AO75192 247 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 PRKD3O94806 890 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 ADAP00813 363 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 YES1P07947 543 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 THBS1P07996 1170 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 SOD3P08294 240 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 PABPC4LP0CB38 370 aaKnown RBP7.62□□□□□ -1.19
CAPN3-213ENST00000565173 PRKCAP17252 672 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 ENPP1P22413 925 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 EDNRAP25101 427 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 ATP12AP54707 1039 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 SUMO3P55854 103 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-213ENST00000565173 ATP5J2P56134 94 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 TNK1Q13470 666 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 TAB1Q15750 504 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 NDUFAF6Q330K2 333 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 TMEM176BQ3YBM2 270 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-213ENST00000565173 SLC25A53Q5H9E4 307 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 TMEM201Q5SNT2 666 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 C6orf136Q5SQH8 315 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 DCST2Q5T1A1 773 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 NCMAPQ5T1S8 102 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 PDSS1Q5T2R2 415 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 DNAJC14Q6Y2X3 702 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-213ENST00000565173 FCRLAQ7L513 359 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 DDIASQ8IXT1 998 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 KRTCAP2Q8N6L1 136 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 ZNF527Q8NB42 609 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 OR5P2Q8WZ92 322 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 HSD17B8Q92506 261 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 ZNF75CPQ92670 426 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-213ENST00000565173 NEUROG1Q92886 237 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 PPP3R2Q96LZ3 170 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 BCO1Q9HAY6 547 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 FANCFQ9NPI8 374 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 TIGARQ9NQ88 270 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 SLC17A7Q9P2U7 560 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 ZDHHC2Q9UIJ5 367 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 KCNE5Q9UJ90 142 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 MID2Q9UJV3 735 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 LAMP3Q9UQV4 416 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 SNX8Q9Y5X2 465 aa7.62□□□□□ -1.19
CAPN3-213ENST00000565173 GPC6Q9Y625 555 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-213ENST00000565173 UQCRHLA0A096LP55 91 aa7.61□□□□□ -1.19
CAPN3-213ENST00000565173 IGHV3-15A0A0B4J1V0 119 aa7.61□□□□□ -1.19
CAPN3-213ENST00000565173 A0A1W2PNR3 127 aa7.61□□□□□ -1.19
CAPN3-213ENST00000565173 DPRXA6NFQ7 191 aa7.61□□□□□ -1.19
CAPN3-213ENST00000565173 LYPLA1O75608 230 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-213ENST00000565173 C6orf47O95873 294 aa7.61□□□□□ -1.19
CAPN3-213ENST00000565173 ATP6V1C1P21283 382 aa7.61□□□□□ -1.19
CAPN3-213ENST00000565173 HPCAL1P37235 193 aa7.61□□□□□ -1.19
CAPN3-213ENST00000565173 RPL3P39023 403 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms