RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PHF11Q9UIL8 331 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 DRD2P14416 443 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 NDUFV2P19404 249 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 CXCL2P19875 107 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 NUP62P37198 522 aaPredicted RBP19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 PDX1P52945 283 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 FGL2Q14314 439 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 OR5M10Q6IEU7 315 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 FAM198BQ6UWH4 519 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 OR52N1Q8NH53 320 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 ADAMTS14Q8WXS8 1223 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 DIO2Q92813 273 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 SLC41A3Q96GZ6 507 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 OR52D1Q9H346 318 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 ASB4Q9Y574 426 aa19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 KIAA0100Q14667 2235 aaKnown RBP19.07■□□□□ 0.64
MAP1LC3B-206ENST00000564844 TRAV27A0A087WT01 109 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 CDHR4A6H8M9 788 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 GNB5O14775 395 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 ARPC5O15511 151 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 ERI3O43414 337 aaKnown RBP19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 ZGLP1P0C6A0 271 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 SULT1A3P0DMM9 295 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 SULT1A4P0DMN0 295 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 CCR8P51685 355 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 TAS2R38P59533 333 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 KIAA1211LQ6NV74 962 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 ZNF620Q6ZNG0 422 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 C17orf107Q6ZR85 190 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 SUN3Q8TAQ9 357 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 OR7D2Q96RA2 312 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 IFT27Q9BW83 186 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 SLC38A1Q9H2H9 487 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 PPA2Q9H2U2 334 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 FKRPQ9H9S5 495 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 SCP2D1Q9UJQ7 156 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 FBXL2Q9UKC9 423 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 BACE2Q9Y5Z0 518 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 DOCK9Q9BZ29 2069 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 A0A0G2JK05 382 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 C4orf51C9J302 202 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 L7N2F9 121 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 PPM1BO75688 479 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 PSMB10P40306 273 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 KHKP50053 298 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 RGMAQ96B86 450 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 PDCD1LG2Q9BQ51 273 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 SPATA5L1Q9BVQ7 753 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 TMEM168Q9H0V1 697 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 PRKAG2Q9UGJ0 569 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 COPS3Q9UNS2 423 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 IGHA1P01876 353 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 LRG1P02750 347 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 TEAD1P28347 426 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 NTSP30990 170 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 NAA10P41227 235 aaPredicted RBP19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 MESP2Q0VG99 397 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 THSD4Q6ZMP0 1018 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 GPAT4Q86UL3 456 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 GPALPP1Q8IXQ4 340 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 LGALS14Q8TCE9 139 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 WDR34Q96EX3 536 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 GPR174Q9BXC1 333 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 USP36Q9P275 1121 aaKnown RBP19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 RPS6KB2Q9UBS0 482 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 KCNMB2Q9Y691 235 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 PRUNE2Q8WUY3 3088 aa19.06■□□□□ 0.64
MAP1LC3B-206ENST00000564844 ZNF106Q9H2Y7 1883 aaKnown RBP19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 ZIC2O95409 532 aaPredicted RBP19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 SYN1P17600 705 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 ATP5A1P25705 553 aaKnown RBP19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 CCR2P41597 374 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 PRPF38BQ5VTL8 546 aaKnown RBP19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 FAM46CQ5VWP2 391 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 FAM122CQ6P4D5 195 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 C3P1Q6ZMU1 363 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 SLC16A11Q8NCK7 471 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 LHFPL5Q8TAF8 219 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 C19orf43Q9BQ61 176 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 ZNF559Q9BR84 538 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 WDR26Q9H7D7 661 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 IL20Q9NYY1 176 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 IL36AQ9UHA7 158 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 hCG_1807616A0A1W2PRN6 198 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 LPLP06858 475 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 SAGP10523 405 aaPredicted RBP19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 CFL1P23528 166 aaKnown RBP19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 METTL3Q86U44 580 aaKnown RBP19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 SHISA5Q8N114 240 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 PTP4A1Q93096 173 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 PEX11GQ96HA9 241 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 OR14A2Q96R54 314 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 NDC1Q9BTX1 674 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 ZMIZ1Q9ULJ6 1067 aa19.05■□□□□ 0.64
MAP1LC3B-206ENST00000564844 A0A087WV48 116 aa19.04■□□□□ 0.64
MAP1LC3B-206ENST00000564844 WASH3PC4AMC7 463 aa19.04■□□□□ 0.64
MAP1LC3B-206ENST00000564844 LRRN3E7EW58 273 aa19.04■□□□□ 0.64
MAP1LC3B-206ENST00000564844 FMO6PO60774 539 aa19.04■□□□□ 0.64
MAP1LC3B-206ENST00000564844 APOC3P02656 99 aa19.04■□□□□ 0.64
MAP1LC3B-206ENST00000564844 PTBP1P26599 531 aaKnown RBP eCLIP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms