RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 EIF1AXP47813 144 aaKnown RBP16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 NDUFAF6Q330K2 333 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 PDSS1Q5T2R2 415 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 PPP4R4Q6NUP7 873 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 OLIG3Q7RTU3 272 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 GGNQ86UU5 652 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 KIF18BQ86Y91 864 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 GPR119Q8TDV5 335 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 FIG4Q92562 907 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 ZNF845Q96IR2 970 aaPredicted RBP16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 LURAP1Q96LR2 239 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 KLHDC3Q9BQ90 382 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 PRRG4Q9BZD6 226 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 TCF7L2Q9NQB0 619 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 PAQR5Q9NXK6 330 aaPredicted RBP16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 JKAMPQ9P055 326 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 L3MBTL1Q9Y468 752 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 ZNF175Q9Y473 711 aa16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 GPC6Q9Y625 555 aaPredicted RBP16.51■□□□□ 0.23
SYNGR3-204ENST00000564642 A0A1W2PNV4 684 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 HMGN4O00479 90 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 KRT75O95678 551 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 CSTAP01040 98 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 PSMA4P25789 261 aaKnown RBP16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 ADH6P28332 368 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 CPA2P48052 419 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 IDH3AP50213 366 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 CCR4P51679 360 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 FOXF1Q12946 379 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 CBFBQ13951 182 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 TYW3Q6IPR3 259 aaKnown RBP16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 ESPNLQ6ZVH7 1005 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 LUZP2Q86TE4 346 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 LILRA2Q8N149 483 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 ZNF619Q8N2I2 560 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 CNEP1R1Q8N9A8 125 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 OR5W2Q8NH69 310 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 FBXO27Q8NI29 283 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 FNDC9Q8TBE3 224 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 POC1BQ8TC44 478 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 PNPT1Q8TCS8 783 aaKnown RBP16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 CKAP2Q8WWK9 683 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 OIT3Q8WWZ8 545 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 ITCHQ96J02 903 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 MAGEB18Q96M61 343 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 CCDC28BQ9BUN5 200 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 RBM24Q9BX46 236 aaKnown RBP16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 LAT2Q9GZY6 243 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 KCNE5Q9UJ90 142 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 LIPT1Q9Y234 373 aa16.5■□□□□ 0.23
SYNGR3-204ENST00000564642 FAM234BA2RU67 622 aa16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 TNFSF11O14788 317 aa16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 KIAA0513O60268 411 aa16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 C1QCP02747 245 aa16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 FCGR2AP12318 317 aa16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 CAPN3P20807 821 aa16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 ELK4P28324 431 aa16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 AQP5P55064 265 aa16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 FUT5Q11128 374 aa16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 DNAJC14Q6Y2X3 702 aaPredicted RBP16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 MSANTD1Q6ZTZ1 278 aa16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 EIF3MQ7L2H7 374 aaKnown RBP16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 HEATR5AQ86XA9 2040 aa16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 OR9I1Q8NGQ6 314 aa16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 OR10D3Q8NH80 312 aa16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 EBF4Q9BQW3 602 aa16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 THUMPD3Q9BV44 507 aaKnown RBP16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 SAP130Q9H0E3 1048 aa16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 TMEM185BQ9H7F4 350 aa16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 PACSIN3Q9UKS6 424 aa16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 MCTS1Q9ULC4 181 aaKnown RBP16.49■□□□□ 0.23
SYNGR3-204ENST00000564642 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 GJE1A6NN92 205 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 TNFSF13O75888 250 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 SMNDC1O75940 238 aaKnown RBP eCLIP16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 SASH3O75995 380 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 SYNGR4O95473 234 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 H6PDO95479 791 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 UBTFL6P0CB48 400 aaPredicted RBP16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 ZCCHC18P0CG32 403 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 SFTPDP35247 375 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 CHRNEQ04844 493 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 FGFBP1Q14512 234 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 QPRTQ15274 297 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 TOMM34Q15785 309 aaPredicted RBP16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 MAPK14Q16539 360 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 SYPL1Q16563 259 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 TIGD2Q4W5G0 525 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 COX20Q5RI15 118 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 C6orf10Q5SRN2 563 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 AP1ARQ63HQ0 302 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 HBMQ6B0K9 141 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 FRRS1Q6ZNA5 592 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 TMEM200AQ86VY9 491 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 ZZZ3Q8IYH5 903 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 OR2V1Q8NHB1 315 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 ZFP90Q8TF47 636 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 VPS33AQ96AX1 596 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 ARSGQ96EG1 525 aa16.48■□□□□ 0.23
SYNGR3-204ENST00000564642 MRGPRX4Q96LA9 322 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms