RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 NID1P14543 1247 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 TNNI3P19429 210 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 GABRA3P34903 492 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 SOX18P35713 384 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 STT3AP46977 705 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 SMSP52788 366 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 PSMD4P55036 377 aaKnown RBP6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 HSD17B7P56937 341 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 EEF1A1P68104 462 aaKnown RBP6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 MGAT2Q10469 447 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 TSPAN31Q12999 210 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 DCTN2Q13561 401 aaKnown RBP6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 SERTAD2Q14140 314 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 PRAMEF17Q5VTA0 474 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 MEDAGQ5VYS4 303 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 TMEM236Q5W0B7 351 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 IGF2-ASQ6U949 168 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 LRRC69Q6ZNQ3 347 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 SLC16A12Q6ZSM3 486 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 RASSF6Q6ZTQ3 369 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 ZNF367Q7RTV3 350 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 GDF7Q7Z4P5 450 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 GPR135Q8IZ08 494 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 CYP4Z2PQ8N1L4 340 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 CLIP4Q8N3C7 705 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 ZNF248Q8NDW4 579 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 SIMC1Q8NDZ2 872 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 OR1L3Q8NH93 324 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 DOK4Q8TEW6 326 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 KCNE4Q8WWG9 221 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 TRUB1Q8WWH5 349 aaKnown RBP6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 ACOT11Q8WXI4 607 aaPredicted RBP6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 PIK3R3Q92569 461 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 HOXB13Q92826 284 aaPredicted RBP6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 RIT1Q92963 219 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 ZNF501Q96CX3 271 aaPredicted RBP6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 SLC41A3Q96GZ6 507 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 RBM18Q96H35 190 aaKnown RBP6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 IL4I1Q96RQ9 567 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 ZPBPQ9BS86 351 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 POLDIP3Q9BY77 421 aaKnown RBP6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 ULBP3Q9BZM4 244 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 FOLH1BQ9HBA9 442 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 NECTIN3Q9NQS3 549 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 FBXO8Q9NRD0 319 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 TBC1D23Q9NUY8 699 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 GPR83Q9NYM4 423 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 SERTAD3Q9UJW9 196 aa6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 GPR55Q9Y2T6 319 aaPredicted RBP6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 RPL36Q9Y3U8 105 aaKnown RBP6.87□□□□□ -1.31
MAP1LC3B-205ENST00000564638 A0A087WUU8 490 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 TEX51A0A1B0GUA7 166 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 GXYLT2A0PJZ3 443 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 IRGMA1A4Y4 181 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 CLDN24A6NM45 220 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 SNTNA6NMZ2 147 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 STMND1H3BQB6 276 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 RRP8O43159 456 aaKnown RBP6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 KLK10O43240 276 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 RAD1O60671 282 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 BCAS1O75363 584 aaPredicted RBP6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 SCRG1O75711 98 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 OR2B3O76000 313 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 MED26O95402 600 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 TIAF1O95411 115 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 TP53P04637 393 aaPredicted RBP6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 IFNA16P05015 189 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 STSP08842 583 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 ADORA3P0DMS8 318 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 LIPCP11150 499 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 FGF5P12034 268 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 ZNF28P17035 718 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 FPR3P25089 353 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 CD82P27701 267 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 GALNSP34059 522 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 TRHRP34981 398 aaPredicted RBP6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 MAP3K8P41279 467 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 STAT5AP42229 794 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 SERPINB10P48595 397 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 PCYT1AP49585 367 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 MAT1AQ00266 395 aaKnown RBP6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 HOXC5Q00444 222 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 ST3GAL4Q11206 333 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 BIKQ13323 160 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 ZNF267Q14586 743 aaPredicted RBP6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 IL11RAQ14626 422 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 IRF3Q14653 427 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 GINS1Q14691 196 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 TGIF1Q15583 401 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 OCLNQ16625 522 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 TIGD6Q17RP2 521 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 ZSWIM7Q19AV6 140 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 TMEM44Q2T9K0 475 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 FLYWCH1Q4VC44 716 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 MRPL2Q5T653 305 aaKnown RBP6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 MFSD4BQ5TF39 518 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 PLAG1Q6DJT9 500 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 PWWP2BQ6NUJ5 590 aa6.86□□□□□ -1.31
MAP1LC3B-205ENST00000564638 FIGNL1Q6PIW4 674 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms