RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 NPIPA1Q9UND3 350 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 ZNF232Q9UNY5 417 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 SLC35A3Q9Y2D2 325 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 LIPGQ9Y5X9 500 aa11.33□□□□□ -0.6
KARS-204ENST00000564578 SERPINB7O75635 380 aa11.32□□□□□ -0.6
KARS-204ENST00000564578 PDE9AO76083 593 aa11.32□□□□□ -0.6
KARS-204ENST00000564578 NCK1P16333 377 aa11.32□□□□□ -0.6
KARS-204ENST00000564578 ENDOUP21128 410 aaKnown RBP11.32□□□□□ -0.6
KARS-204ENST00000564578 MSX1P28360 303 aa11.32□□□□□ -0.6
KARS-204ENST00000564578 PRKAR1BP31321 381 aa11.32□□□□□ -0.6
KARS-204ENST00000564578 P2RX1P51575 399 aa11.32□□□□□ -0.6
KARS-204ENST00000564578 DSCR4P56555 118 aaPredicted RBP11.32□□□□□ -0.6
KARS-204ENST00000564578 SLC10A1Q14973 349 aa11.32□□□□□ -0.6
KARS-204ENST00000564578 LARS2Q15031 903 aaKnown RBP11.32□□□□□ -0.6
KARS-204ENST00000564578 TOMM34Q15785 309 aaPredicted RBP11.32□□□□□ -0.6
KARS-204ENST00000564578 EIPR1Q53HC9 387 aa11.32□□□□□ -0.6
KARS-204ENST00000564578 DHRS4L2Q6PKH6 230 aa11.32□□□□□ -0.6
KARS-204ENST00000564578 PATL1Q86TB9 770 aaKnown RBP11.32□□□□□ -0.6
KARS-204ENST00000564578 ARMC8Q8IUR7 673 aa11.32□□□□□ -0.6
KARS-204ENST00000564578 FAM83FQ8NEG4 500 aaPredicted RBP11.32□□□□□ -0.6
KARS-204ENST00000564578 OR4K17Q8NGC6 315 aa11.32□□□□□ -0.6
KARS-204ENST00000564578 CLPTM1LQ96KA5 538 aa11.32□□□□□ -0.6
KARS-204ENST00000564578 BTBD10Q9BSF8 475 aa11.32□□□□□ -0.6
KARS-204ENST00000564578 AGPAT4Q9NRZ5 378 aa11.32□□□□□ -0.6
KARS-204ENST00000564578 B4GALT7Q9UBV7 327 aa11.32□□□□□ -0.6
KARS-204ENST00000564578 SEC14L3Q9UDX4 400 aa11.32□□□□□ -0.6
KARS-204ENST00000564578 CXCR6O00574 342 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 GYG2O15488 501 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 ZNHIT1O43257 154 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 CYP7B1O75881 506 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 IGHG3P01860 377 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 LINGO3P0C6S8 592 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 PRG2P13727 222 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 GGT1P19440 569 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 CD247P20963 164 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 DPP4P27487 766 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 SRD5A2P31213 254 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 ACAA2P42765 397 aaKnown RBP11.31□□□□□ -0.6
KARS-204ENST00000564578 KCNJ5P48544 419 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 SPATS1Q496A3 300 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 YRDCQ86U90 279 aaKnown RBP11.31□□□□□ -0.6
KARS-204ENST00000564578 OR5W2Q8NH69 310 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 GPR119Q8TDV5 335 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 FIG4Q92562 907 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 GPR137Q96N19 417 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 SPATA5L1Q9BVQ7 753 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 PCDHAC1Q9H158 963 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 PTGES2Q9H7Z7 377 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 EXOSC3Q9NQT5 275 aaKnown RBP11.31□□□□□ -0.6
KARS-204ENST00000564578 MRPS18CQ9Y3D5 142 aaKnown RBP11.31□□□□□ -0.6
KARS-204ENST00000564578 ZGRF1Q86YA3 2104 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 ANKUB1A6NFN9 424 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 H0YHG0 523 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 EBAG9O00559 213 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 FRS3O43559 492 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 CDC40O60508 579 aaKnown RBP eCLIP11.31□□□□□ -0.6
KARS-204ENST00000564578 TRAPPC6AO75865 159 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 GKN3PP0CG01 181 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 B3GALT5-AS1P59052 145 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 HSF1Q00613 529 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 TLE1Q04724 770 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 TOMM20Q15388 145 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 TMEM44Q2T9K0 475 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 PLPPR5Q32ZL2 321 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 WIPI1Q5MNZ9 446 aaPredicted RBP11.31□□□□□ -0.6
KARS-204ENST00000564578 FGD2Q7Z6J4 655 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 ARHGAP24Q8N264 748 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 ARPC5LQ9BPX5 153 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 THTPAQ9BU02 230 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 OR2B2Q9GZK3 357 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 SLC6A15Q9H2J7 730 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 HHATLQ9HCP6 504 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 MED17Q9NVC6 651 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 TAS2R10Q9NYW0 307 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 PRPF19Q9UMS4 504 aaKnown RBP11.31□□□□□ -0.6
KARS-204ENST00000564578 VDAC3Q9Y277 283 aa11.31□□□□□ -0.6
KARS-204ENST00000564578 A0A1B0GVC2 190 aa11.3□□□□□ -0.6
KARS-204ENST00000564578 ETV2O00321 342 aaPredicted RBP11.3□□□□□ -0.6
KARS-204ENST00000564578 AP3D1O14617 1153 aa11.3□□□□□ -0.6
KARS-204ENST00000564578 GSC2O15499 205 aa11.3□□□□□ -0.6
KARS-204ENST00000564578 TPST2O60704 377 aa11.3□□□□□ -0.6
KARS-204ENST00000564578 PDE5AO76074 875 aa11.3□□□□□ -0.6
KARS-204ENST00000564578 LGI1O95970 557 aa11.3□□□□□ -0.6
KARS-204ENST00000564578 TCEA1P23193 301 aaKnown RBP11.3□□□□□ -0.6
KARS-204ENST00000564578 PSMA4P25789 261 aaKnown RBP11.3□□□□□ -0.6
KARS-204ENST00000564578 RYKP34925 604 aa11.3□□□□□ -0.6
KARS-204ENST00000564578 ZNF136P52737 540 aa11.3□□□□□ -0.6
KARS-204ENST00000564578 SUMO3P55854 103 aaPredicted RBP11.3□□□□□ -0.6
KARS-204ENST00000564578 GFRA1P56159 465 aa11.3□□□□□ -0.6
KARS-204ENST00000564578 GANABQ14697 944 aaKnown RBP11.3□□□□□ -0.6
KARS-204ENST00000564578 ZSCAN26Q16670 478 aa11.3□□□□□ -0.6
KARS-204ENST00000564578 LRRC23Q53EV4 343 aaPredicted RBP11.3□□□□□ -0.6
KARS-204ENST00000564578 KRTCAP3Q53RY4 240 aa11.3□□□□□ -0.6
KARS-204ENST00000564578 GLYATQ6IB77 296 aa11.3□□□□□ -0.6
KARS-204ENST00000564578 PGM2L1Q6PCE3 622 aa11.3□□□□□ -0.6
KARS-204ENST00000564578 TRILQ7L0X0 811 aa11.3□□□□□ -0.6
KARS-204ENST00000564578 PRICKLE2Q7Z3G6 844 aa11.3□□□□□ -0.6
KARS-204ENST00000564578 LSRQ86X29 649 aaPredicted RBP11.3□□□□□ -0.6
KARS-204ENST00000564578 SPPL2CQ8IUH8 684 aa11.3□□□□□ -0.6
KARS-204ENST00000564578 TOR1AIP2Q8NFQ8 470 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms