RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 TSSK3Q96PN8 268 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 STACQ99469 402 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 TRAF4Q9BUZ4 470 aaPredicted RBP12.51□□□□□ -0.41
CDR2-204ENST00000564542 GRIP2Q9C0E4 1043 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 ALG2Q9H553 416 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 COQ10BQ9H8M1 238 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 L2HGDHQ9H9P8 463 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 YAE1D1Q9NRH1 226 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 DUSP22Q9NRW4 184 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 FAIMQ9NVQ4 179 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 SH3BP4Q9P0V3 963 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 PTGDR2Q9Y5Y4 395 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 ACTL7BQ9Y614 415 aa12.51□□□□□ -0.41
CDR2-204ENST00000564542 GPC6Q9Y625 555 aaPredicted RBP12.51□□□□□ -0.41
CDR2-204ENST00000564542 DPRXA6NFQ7 191 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 ZNF814B7Z6K7 855 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 ZNF195O14628 629 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 EFNA2O43921 213 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 ADAM11O75078 769 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 NUDT14O95848 222 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 PROCP04070 461 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 NEFHP12036 1026 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 P2RX1P51575 399 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 MLC1Q15049 377 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 CLEC6AQ6EIG7 209 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 CBLN3Q6UW01 205 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 RNF165Q6ZSG1 346 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 Q6ZT83 130 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 DTX2Q86UW9 622 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 PHC2Q8IXK0 858 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 ZNF527Q8NB42 609 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 OR2T11Q8NH01 316 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 FBXO27Q8NI29 283 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 PHOSPHO1Q8TCT1 267 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 CDS1Q92903 461 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 MTERF3Q96E29 417 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 FAM120BQ96EK7 910 aaKnown RBP12.5□□□□□ -0.41
CDR2-204ENST00000564542 BCO1Q9HAY6 547 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 ZCCHC3Q9NUD5 404 aaKnown RBP12.5□□□□□ -0.41
CDR2-204ENST00000564542 GIN1Q9NXP7 522 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 KLHL9Q9P2J3 617 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 ICAM5Q9UMF0 924 aa12.5□□□□□ -0.41
CDR2-204ENST00000564542 FREM1Q5H8C1 2179 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 H3BNH8 94 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 OIP5O43482 229 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 NDUFS7O75251 213 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 CD8AP01732 235 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 HMGN2P05204 90 aaKnown RBP12.49□□□□□ -0.41
CDR2-204ENST00000564542 PRKCAP17252 672 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 ATP6V1C1P21283 382 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 OR3A2P47893 321 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 RPL38P63173 70 aaKnown RBP12.49□□□□□ -0.41
CDR2-204ENST00000564542 SELENBP1Q13228 472 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 LASP1Q14847 261 aaKnown RBP12.49□□□□□ -0.41
CDR2-204ENST00000564542 NRF1Q16656 503 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 TMEM176BQ3YBM2 270 aaPredicted RBP12.49□□□□□ -0.41
CDR2-204ENST00000564542 CCDC153Q494R4 210 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 CHRFAM7AQ494W8 412 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 KLHL26Q53HC5 615 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 Q6ZSR9 355 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 SSX8Q7RTT4 187 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 MNS1Q8NEH6 495 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 CLHC1Q8NHS4 586 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 MRGPRX4Q96LA9 322 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 C16orf45Q96MC5 204 aaPredicted RBP12.49□□□□□ -0.41
CDR2-204ENST00000564542 PSD2Q9BQI7 771 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 HOXD1Q9GZZ0 328 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 PIGUQ9H490 435 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 CXorf36Q9H7Y0 433 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 SIRT3Q9NTG7 399 aaPredicted RBP12.49□□□□□ -0.41
CDR2-204ENST00000564542 OXSMQ9NWU1 459 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 CISD1Q9NZ45 108 aaKnown RBP12.49□□□□□ -0.41
CDR2-204ENST00000564542 TBK1Q9UHD2 729 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 GDF2Q9UK05 429 aaPredicted RBP12.49□□□□□ -0.41
CDR2-204ENST00000564542 ING1Q9UK53 422 aaPredicted RBP12.49□□□□□ -0.41
CDR2-204ENST00000564542 CARD8Q9Y2G2 431 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 TMED5Q9Y3A6 229 aa12.49□□□□□ -0.41
CDR2-204ENST00000564542 IGHV3-15A0A0B4J1V0 119 aa12.48□□□□□ -0.41
CDR2-204ENST00000564542 A8MV72 311 aaPredicted RBP12.48□□□□□ -0.41
CDR2-204ENST00000564542 SHISA9B4DS77 424 aa12.48□□□□□ -0.41
CDR2-204ENST00000564542 AZIN1O14977 448 aa12.48□□□□□ -0.41
CDR2-204ENST00000564542 PLIN3O60664 434 aa12.48□□□□□ -0.41
CDR2-204ENST00000564542 RAMP1O60894 148 aa12.48□□□□□ -0.41
CDR2-204ENST00000564542 LYZL6O75951 148 aa12.48□□□□□ -0.41
CDR2-204ENST00000564542 DDX5P17844 614 aaKnown RBP12.48□□□□□ -0.41
CDR2-204ENST00000564542 EFNA1P20827 205 aaPredicted RBP12.48□□□□□ -0.41
CDR2-204ENST00000564542 ENPP1P22413 925 aa12.48□□□□□ -0.41
CDR2-204ENST00000564542 SLC7A1P30825 629 aa12.48□□□□□ -0.41
CDR2-204ENST00000564542 ASMTP46597 345 aa12.48□□□□□ -0.41
CDR2-204ENST00000564542 CDH11P55287 796 aa12.48□□□□□ -0.41
CDR2-204ENST00000564542 RAC3P60763 192 aa12.48□□□□□ -0.41
CDR2-204ENST00000564542 PPA1Q15181 289 aa12.48□□□□□ -0.41
CDR2-204ENST00000564542 STK11Q15831 433 aa12.48□□□□□ -0.41
CDR2-204ENST00000564542 RFTN2Q52LD8 501 aaPredicted RBP12.48□□□□□ -0.41
CDR2-204ENST00000564542 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.48□□□□□ -0.41
CDR2-204ENST00000564542 CDC73Q6P1J9 531 aa12.48□□□□□ -0.41
CDR2-204ENST00000564542 R3HCC1LQ7Z5L2 792 aaKnown RBP12.48□□□□□ -0.41
CDR2-204ENST00000564542 ATP6V1C2Q8NEY4 427 aa12.48□□□□□ -0.41
CDR2-204ENST00000564542 GPR119Q8TDV5 335 aa12.48□□□□□ -0.41
CDR2-204ENST00000564542 TMEM158Q8WZ71 300 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms