RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 GPR52Q9Y2T5 361 aa13.42□□□□□ -0.26
SPG7-210ENST00000564409 RAI1Q7Z5J4 1906 aaPredicted RBP13.42□□□□□ -0.26
SPG7-210ENST00000564409 ROS1P08922 2347 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 FAM171A2A8MVW0 826 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 RNASET2O00584 256 aaKnown RBP13.41□□□□□ -0.26
SPG7-210ENST00000564409 ZNF195O14628 629 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 TM9SF1O15321 606 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 AGR2O95994 175 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 SERPINE1P05121 402 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 GUSBP08236 651 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 MYZAPP0CAP1 466 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 G6PDP11413 515 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 PSMB1P20618 241 aaKnown RBP13.41□□□□□ -0.26
SPG7-210ENST00000564409 HBA1P69905 142 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 ZNF239Q16600 458 aaKnown RBP13.41□□□□□ -0.26
SPG7-210ENST00000564409 EXOC3L2Q2M3D2 409 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 SLC25A53Q5H9E4 307 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 SLC43A2Q8N370 569 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 KRTCAP2Q8N6L1 136 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 WFDC11Q8NEX6 87 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 VPS37AQ8NEZ2 397 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 OR8J2Q8NGG1 315 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 GPR119Q8TDV5 335 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 RNF128Q8TEB7 428 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 OTUB1Q96FW1 271 aaPredicted RBP13.41□□□□□ -0.26
SPG7-210ENST00000564409 POM121Q96HA1 1249 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 C18orf12Q96KH6 178 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 OR7D2Q96RA2 312 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 SDF2Q99470 211 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 PCDHGB4Q9UN71 923 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 CARD8Q9Y2G2 431 aa13.41□□□□□ -0.26
SPG7-210ENST00000564409 ZNF469Q96JG9 3925 aaPredicted RBP13.41□□□□□ -0.26
SPG7-210ENST00000564409 FREM1Q5H8C1 2179 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 ETV2O00321 342 aaPredicted RBP13.4□□□□□ -0.26
SPG7-210ENST00000564409 ZNF264O43296 627 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 STX11O75558 287 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 NTN1O95631 604 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 NID1P14543 1247 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 CREB1P16220 341 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 PRKCAP17252 672 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 AGTR1P30556 359 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 SELENBP1Q13228 472 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 CBFBQ13951 182 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 DPY19L1Q2PZI1 675 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 PGS1Q32NB8 556 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 KRT71Q3SY84 523 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 TMEM201Q5SNT2 666 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 ANXA8L1Q5VT79 327 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 AP1ARQ63HQ0 302 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 ZNF550Q7Z398 422 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 CROCCP2Q86T23 111 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 P3H2Q8IVL5 708 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 STEAP2Q8NFT2 490 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 OR5W2Q8NH69 310 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 FBXO27Q8NI29 283 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 MIPOL1Q8TD10 442 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 CCL19Q99731 98 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 NPAS1Q99742 590 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 TMEM185BQ9H7F4 350 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 POLE3Q9NRF9 147 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 EXD2Q9NVH0 621 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 RAP2CQ9Y3L5 183 aa13.4□□□□□ -0.26
SPG7-210ENST00000564409 NF1P21359 2839 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 RGS16O15492 202 aaPredicted RBP13.39□□□□□ -0.27
SPG7-210ENST00000564409 DIAPH2O60879 1101 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 DNAJA2O60884 412 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 PRKD3O94806 890 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 OPN1LWP04000 364 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 UBL4AP11441 157 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 MATN1P21941 496 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 LOXP28300 417 aaPredicted RBP13.39□□□□□ -0.27
SPG7-210ENST00000564409 SFTPDP35247 375 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 SOAT1P35610 550 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 RAC3P60763 192 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 ABCE1P61221 599 aaKnown RBP13.39□□□□□ -0.27
SPG7-210ENST00000564409 FOXF1Q12946 379 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 ZNF141Q15928 474 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 ARHGAP11BQ3KRB8 267 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 TMEM176BQ3YBM2 270 aaPredicted RBP13.39□□□□□ -0.27
SPG7-210ENST00000564409 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.39□□□□□ -0.27
SPG7-210ENST00000564409 CBLN3Q6UW01 205 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 C6orf120Q7Z4R8 191 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 KRTAP1-3Q8IUG1 177 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 ST8SIA1Q92185 356 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 TESCQ96BS2 214 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 ZC3HAV1LQ96H79 300 aaKnown RBP13.39□□□□□ -0.27
SPG7-210ENST00000564409 ZNF395Q9H8N7 513 aaPredicted RBP13.39□□□□□ -0.27
SPG7-210ENST00000564409 UBTD1Q9HAC8 227 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 KLHL13Q9P2N7 655 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 CLEC4AQ9UMR7 237 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 KCNE3Q9Y6H6 103 aa13.39□□□□□ -0.27
SPG7-210ENST00000564409 PRSS51A0A1B0GVH4 220 aa13.38□□□□□ -0.27
SPG7-210ENST00000564409 SERINC4A6NH21 518 aa13.38□□□□□ -0.27
SPG7-210ENST00000564409 KLF4O43474 513 aa13.38□□□□□ -0.27
SPG7-210ENST00000564409 EFNA2O43921 213 aa13.38□□□□□ -0.27
SPG7-210ENST00000564409 THBDP07204 575 aa13.38□□□□□ -0.27
SPG7-210ENST00000564409 YES1P07947 543 aa13.38□□□□□ -0.27
SPG7-210ENST00000564409 INHBBP09529 407 aa13.38□□□□□ -0.27
SPG7-210ENST00000564409 DHRS4L1P0CG22 281 aa13.38□□□□□ -0.27
SPG7-210ENST00000564409 SLC7A1P30825 629 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms