RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-223	ENST00000564343	RDH11	Q8TC12	318 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	EXT2	Q93063	718 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	HGD	Q93099	445 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	STARD4	Q96DR4	205 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	CMTM7	Q96FZ5	175 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	ZFP3	Q96NJ6	502 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	FAM111A	Q96PZ2	611 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	OSBPL9	Q96SU4	736 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	SECISBP2	Q96T21	854 aa	Known RBP	4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	MTERF1	Q99551	399 aa	Known RBP	4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	MED18	Q9BUE0	208 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	NXF5	Q9H1B4	397 aa	Known RBP	4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	OPN3	Q9H1Y3	402 aa	Predicted RBP	4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	PIGM	Q9H3S5	423 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	METTL7A	Q9H8H3	244 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	CNOT10	Q9H9A5	744 aa	Known RBP	4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	CXorf21	Q9HAI6	301 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	SERHL	Q9NQF3	203 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	SMYD2	Q9NRG4	433 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	SNX15	Q9NRS6	342 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	RLIM	Q9NVW2	624 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	ZNF226	Q9NYT6	803 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	EHD3	Q9NZN3	535 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	CD274	Q9NZQ7	290 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	HEY2	Q9UBP5	337 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	PHF11	Q9UIL8	331 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	EXO1	Q9UQ84	846 aa	Known RBP	4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	ALPK2	Q86TB3	2170 aa		4.64	□□□□□ -1.67
TCF4-223	ENST00000564343	ANK2	Q01484	3957 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	C17orf51	A8MQB3	221 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.63	□□□□□ -1.67
TCF4-223	ENST00000564343		F5H697	171 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343		H0YC42	278 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	TP73	O15350	636 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	HCRTR2	O43614	444 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	UGT2B11	O75310	529 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	CBR3	O75828	277 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	CHEK2	O96017	543 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	PLAU	P00749	431 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	CGA	P01215	116 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	FAM58BP	P0C7Q3	252 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	SLC35E2B	P0CK96	405 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	SLC35E2	P0CK97	266 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	CCDC166	P0CW27	439 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	NR2F6	P10588	404 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	ZNF708	P17019	499 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	GPX3	P22352	226 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	TCEA1	P23193	301 aa	Known RBP	4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	CHM	P24386	653 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	CNTF	P26441	200 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	TLX1	P31314	330 aa	Predicted RBP	4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	CD79B	P40259	229 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	FNTA	P49354	379 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	TMED10	P49755	219 aa	Known RBP	4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	RAP1GDS1	P52306	607 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	DIO3	P55073	304 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	TPD52	P55327	224 aa	Predicted RBP	4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	CLDN15	P56746	228 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	RPS13	P62277	151 aa	Known RBP	4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	GAB1	Q13480	694 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	EXOSC7	Q15024	291 aa	Known RBP	4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	PDCD2	Q16342	344 aa	Predicted RBP	4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	KBTBD12	Q3ZCT8	623 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	KHDC1L	Q5JSQ8	128 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	PLAC9	Q5JTB6	97 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	CDKL4	Q5MAI5	379 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	OR5M10	Q6IEU7	315 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	GRHL2	Q6ISB3	625 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	TMEM81	Q6P7N7	255 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	CYP20A1	Q6UW02	462 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	ENPP6	Q6UWR7	440 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	PLEKHM3	Q6ZWE6	761 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	IFNE	Q86WN2	208 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	GRAMD2A	Q8IUY3	354 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	PDIK1L	Q8N165	341 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	CNEP1R1	Q8N9A8	125 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	C7orf57	Q8NEG2	295 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	C17orf47	Q8NEP4	570 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	SEMA6D	Q8NFY4	1073 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	OR14L1P	Q8NHC6	308 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	POC1B	Q8TC44	478 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	GRK7	Q8WTQ7	553 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	DPF1	Q92782	380 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	PGM2	Q96G03	612 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	UBXN10	Q96LJ8	280 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	PELO	Q9BRX2	385 aa	Known RBP	4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	OSBPL11	Q9BXB4	747 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	OR2B2	Q9GZK3	357 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	DDX47	Q9H0S4	455 aa	Known RBP	4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	MRPL46	Q9H2W6	279 aa	Known RBP	4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	RHOJ	Q9H4E5	214 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	DDX31	Q9H8H2	851 aa	Known RBP	4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	POPDC3	Q9HBV1	291 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	ASIC3	Q9UHC3	531 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	FBXL2	Q9UKC9	423 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343	SLC45A2	Q9UMX9	530 aa		4.63	□□□□□ -1.67
TCF4-223	ENST00000564343		A0A087WV62	115 aa		4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.62	□□□□□ -1.67
TCF4-223	ENST00000564343	C16orf97	H3BN30	126 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms