RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 COQ8BQ96D53 544 aa21.29■■□□□ 1
NME3-206ENST00000564252 PLPPR2Q96GM1 343 aa21.29■■□□□ 1
NME3-206ENST00000564252 TMEM204Q9BSN7 226 aa21.29■■□□□ 1
NME3-206ENST00000564252 BDH2Q9BUT1 245 aa21.29■■□□□ 1
NME3-206ENST00000564252 HOXD1Q9GZZ0 328 aa21.29■■□□□ 1
NME3-206ENST00000564252 CARD8Q9Y2G2 431 aa21.29■■□□□ 1
NME3-206ENST00000564252 ACTL7BQ9Y614 415 aa21.29■■□□□ 1
NME3-206ENST00000564252 NUP214P35658 2090 aaPredicted RBP21.28■■□□□ 1
NME3-206ENST00000564252 TRIM64A6NGJ6 449 aa21.28■■□□□ 1
NME3-206ENST00000564252 TRIM64BA6NI03 449 aa21.28■■□□□ 1
NME3-206ENST00000564252 NPIPB9F8W1W9 429 aa21.28■■□□□ 1
NME3-206ENST00000564252 LYPLA1O75608 230 aaPredicted RBP21.28■■□□□ 1
NME3-206ENST00000564252 C6orf47O95873 294 aa21.28■■□□□ 1
NME3-206ENST00000564252 NUDT17P0C025 328 aa21.28■■□□□ 1
NME3-206ENST00000564252 PABPC4LP0CB38 370 aaKnown RBP21.28■■□□□ 1
NME3-206ENST00000564252 SUMO3P55854 103 aaPredicted RBP21.28■■□□□ 1
NME3-206ENST00000564252 ZNF844Q08AG5 666 aa21.28■■□□□ 1
NME3-206ENST00000564252 TOMM34Q15785 309 aaPredicted RBP21.28■■□□□ 1
NME3-206ENST00000564252 WFDC8Q8IUA0 241 aa21.28■■□□□ 1
NME3-206ENST00000564252 RIMKLAQ8IXN7 391 aa21.28■■□□□ 1
NME3-206ENST00000564252 NATD1Q8N6N6 113 aa21.28■■□□□ 1
NME3-206ENST00000564252 SFXN5Q8TD22 340 aa21.28■■□□□ 1
NME3-206ENST00000564252 TCP10LQ8TDR4 215 aa21.28■■□□□ 1
NME3-206ENST00000564252 GPR119Q8TDV5 335 aa21.28■■□□□ 1
NME3-206ENST00000564252 CPNE4Q96A23 557 aaPredicted RBP21.28■■□□□ 1
NME3-206ENST00000564252 L2HGDHQ9H9P8 463 aa21.28■■□□□ 1
NME3-206ENST00000564252 ATAD3AQ9NVI7 634 aa21.28■■□□□ 1
NME3-206ENST00000564252 LGALS13Q9UHV8 139 aa21.28■■□□□ 1
NME3-206ENST00000564252 ZDHHC2Q9UIJ5 367 aa21.28■■□□□ 1
NME3-206ENST00000564252 FAF1Q9UNN5 650 aaPredicted RBP21.28■■□□□ 1
NME3-206ENST00000564252 GPC6Q9Y625 555 aaPredicted RBP21.28■■□□□ 1
NME3-206ENST00000564252 ZNF195O14628 629 aa21.27■■□□□ 1
NME3-206ENST00000564252 GCM2O75603 506 aaPredicted RBP21.27■■□□□ 1
NME3-206ENST00000564252 NUDT14O95848 222 aa21.27■■□□□ 1
NME3-206ENST00000564252 KRT16P08779 473 aa21.27■■□□□ 1
NME3-206ENST00000564252 PAX1P15863 534 aa21.27■■□□□ 1
NME3-206ENST00000564252 SERPINB5P36952 375 aa21.27■■□□□ 1
NME3-206ENST00000564252 ATP12AP54707 1039 aa21.27■■□□□ 1
NME3-206ENST00000564252 RNPS1Q15287 305 aaKnown RBP21.27■■□□□ 1
NME3-206ENST00000564252 LSM12Q3MHD2 195 aaKnown RBP21.27■■□□□ 1
NME3-206ENST00000564252 SPDYE7PQ495Y7 208 aa21.27■■□□□ 1
NME3-206ENST00000564252 IL23RQ5VWK5 629 aa21.27■■□□□ 1
NME3-206ENST00000564252 TFAP2EQ6VUC0 442 aa21.27■■□□□ 1
NME3-206ENST00000564252 FNDC5Q8NAU1 212 aa21.27■■□□□ 1
NME3-206ENST00000564252 ZNF524Q96C55 264 aa21.27■■□□□ 1
NME3-206ENST00000564252 COQ10BQ9H8M1 238 aa21.27■■□□□ 1
NME3-206ENST00000564252 TIGARQ9NQ88 270 aa21.27■■□□□ 1
NME3-206ENST00000564252 KLHL13Q9P2N7 655 aa21.27■■□□□ 1
NME3-206ENST00000564252 H3BNH8 94 aa21.26■□□□□ 0.99
NME3-206ENST00000564252 SMAD7O15105 426 aaKnown RBP21.26■□□□□ 0.99
NME3-206ENST00000564252 SKAP2O75563 359 aaPredicted RBP21.26■□□□□ 0.99
NME3-206ENST00000564252 SOX30O94993 753 aa21.26■□□□□ 0.99
NME3-206ENST00000564252 NTN1O95631 604 aa21.26■□□□□ 0.99
NME3-206ENST00000564252 PRKCAP17252 672 aa21.26■□□□□ 0.99
NME3-206ENST00000564252 NDUFAF6Q330K2 333 aa21.26■□□□□ 0.99
NME3-206ENST00000564252 NUFIP2Q7Z417 695 aaKnown RBP21.26■□□□□ 0.99
NME3-206ENST00000564252 TUSC5Q8IXB3 177 aa21.26■□□□□ 0.99
NME3-206ENST00000564252 GABRG1Q8N1C3 465 aa21.26■□□□□ 0.99
NME3-206ENST00000564252 MOAP1Q96BY2 351 aa21.26■□□□□ 0.99
NME3-206ENST00000564252 REXO5Q96IC2 774 aaKnown RBP21.26■□□□□ 0.99
NME3-206ENST00000564252 BHLHE41Q9C0J9 482 aaPredicted RBP21.26■□□□□ 0.99
NME3-206ENST00000564252 ANKZF1Q9H8Y5 726 aa21.26■□□□□ 0.99
NME3-206ENST00000564252 DTNAQ9Y4J8 743 aa21.26■□□□□ 0.99
NME3-206ENST00000564252 HS3ST1O14792 307 aa21.25■□□□□ 0.99
NME3-206ENST00000564252 PRPS1L1P21108 318 aa21.25■□□□□ 0.99
NME3-206ENST00000564252 TMEM176BQ3YBM2 270 aaPredicted RBP21.25■□□□□ 0.99
NME3-206ENST00000564252 TMEM201Q5SNT2 666 aa21.25■□□□□ 0.99
NME3-206ENST00000564252 FCRLAQ7L513 359 aa21.25■□□□□ 0.99
NME3-206ENST00000564252 ZNF611Q8N823 705 aa21.25■□□□□ 0.99
NME3-206ENST00000564252 STEAP2Q8NFT2 490 aa21.25■□□□□ 0.99
NME3-206ENST00000564252 OR5AK3PQ8NH89 298 aa21.25■□□□□ 0.99
NME3-206ENST00000564252 ZFP90Q8TF47 636 aa21.25■□□□□ 0.99
NME3-206ENST00000564252 TMEM171Q8WVE6 324 aa21.25■□□□□ 0.99
NME3-206ENST00000564252 S100PBPQ96BU1 408 aa21.25■□□□□ 0.99
NME3-206ENST00000564252 OR7D2Q96RA2 312 aa21.25■□□□□ 0.99
NME3-206ENST00000564252 PRPF18Q99633 342 aaKnown RBP21.25■□□□□ 0.99
NME3-206ENST00000564252 GP6Q9HCN6 339 aa21.25■□□□□ 0.99
NME3-206ENST00000564252 ZNF701Q9NV72 531 aaPredicted RBP21.25■□□□□ 0.99
NME3-206ENST00000564252 JMJD1CQ15652 2540 aa21.25■□□□□ 0.99
NME3-206ENST00000564252 USF3Q68DE3 2245 aa21.25■□□□□ 0.99
NME3-206ENST00000564252 FREM1Q5H8C1 2179 aa21.24■□□□□ 0.99
NME3-206ENST00000564252 GJE1A6NN92 205 aa21.24■□□□□ 0.99
NME3-206ENST00000564252 GTPBP1O00178 669 aaKnown RBP21.24■□□□□ 0.99
NME3-206ENST00000564252 HBA1P69905 142 aa21.24■□□□□ 0.99
NME3-206ENST00000564252 SLC25A53Q5H9E4 307 aa21.24■□□□□ 0.99
NME3-206ENST00000564252 ZNF614Q8N883 585 aa21.24■□□□□ 0.99
NME3-206ENST00000564252 OR5D16Q8NGK9 328 aa21.24■□□□□ 0.99
NME3-206ENST00000564252 MRGPRX4Q96LA9 322 aa21.24■□□□□ 0.99
NME3-206ENST00000564252 DUSP26Q9BV47 211 aa21.24■□□□□ 0.99
NME3-206ENST00000564252 HDHD5Q9BXW7 423 aa21.24■□□□□ 0.99
NME3-206ENST00000564252 CSPG4Q6UVK1 2322 aa21.24■□□□□ 0.99
NME3-206ENST00000564252 ESPNB1AK53 854 aa21.23■□□□□ 0.99
NME3-206ENST00000564252 ETV2O00321 342 aaPredicted RBP21.23■□□□□ 0.99
NME3-206ENST00000564252 TMCC2O75069 709 aa21.23■□□□□ 0.99
NME3-206ENST00000564252 PRKD3O94806 890 aa21.23■□□□□ 0.99
NME3-206ENST00000564252 CNOT4O95628 575 aaKnown RBP21.23■□□□□ 0.99
NME3-206ENST00000564252 BPGMP07738 259 aa21.23■□□□□ 0.99
NME3-206ENST00000564252 G6PDP11413 515 aa21.23■□□□□ 0.99
NME3-206ENST00000564252 CREB1P16220 341 aa21.23■□□□□ 0.99
NME3-206ENST00000564252 C21orf58P58505 322 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms