RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 POTEKPQ9BYX7 375 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 BARX1Q9HBU1 254 aaPredicted RBP18.58■□□□□ 0.56
HERC2-204ENST00000563945 TNFRSF12AQ9NP84 129 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 YAE1D1Q9NRH1 226 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 DUSP22Q9NRW4 184 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 FAIMQ9NVQ4 179 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 OXSMQ9NWU1 459 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 KLHL9Q9P2J3 617 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 FAF1Q9UNN5 650 aaPredicted RBP18.58■□□□□ 0.56
HERC2-204ENST00000563945 PTGDR2Q9Y5Y4 395 aa18.58■□□□□ 0.56
HERC2-204ENST00000563945 NPIPB8E9PQR5 432 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 KIF2AO00139 706 aaPredicted RBP18.57■□□□□ 0.56
HERC2-204ENST00000563945 TLX2O43763 284 aaPredicted RBP18.57■□□□□ 0.56
HERC2-204ENST00000563945 PLIN3O60664 434 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 HMGN2P05204 90 aaKnown RBP18.57■□□□□ 0.56
HERC2-204ENST00000563945 LINC00032P0C843 101 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 DANCRP0C864 163 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 EFNA1P20827 205 aaPredicted RBP18.57■□□□□ 0.56
HERC2-204ENST00000563945 SHC1P29353 583 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 HPCAL1P37235 193 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 RPL3P39023 403 aaKnown RBP18.57■□□□□ 0.56
HERC2-204ENST00000563945 FRKP42685 505 aaPredicted RBP18.57■□□□□ 0.56
HERC2-204ENST00000563945 ZNF117Q03924 483 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 LASP1Q14847 261 aaKnown RBP18.57■□□□□ 0.56
HERC2-204ENST00000563945 STK11Q15831 433 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 SPDYE7PQ495Y7 208 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 LIPMQ5VYY2 423 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 PODNL1Q6PEZ8 512 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 ZNF614Q8N883 585 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 LILRB1Q8NHL6 650 aaPredicted RBP18.57■□□□□ 0.56
HERC2-204ENST00000563945 PIWIL2Q8TC59 973 aaKnown RBP18.57■□□□□ 0.56
HERC2-204ENST00000563945 ADAMTS15Q8TE58 950 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 CDS1Q92903 461 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 MUCL1Q96DR8 90 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 STACQ99469 402 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 SRXN1Q9BYN0 137 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 SLCO5A1Q9H2Y9 848 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 PIGUQ9H490 435 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 MID2Q9UJV3 735 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 CARD8Q9Y2G2 431 aa18.57■□□□□ 0.56
HERC2-204ENST00000563945 MAGED1Q9Y5V3 778 aaPredicted RBP18.57■□□□□ 0.56
HERC2-204ENST00000563945 RNF212BA8MTL3 300 aa18.56■□□□□ 0.56
HERC2-204ENST00000563945 TMEM114B3SHH9 223 aa18.56■□□□□ 0.56
HERC2-204ENST00000563945 COPEO14579 308 aa18.56■□□□□ 0.56
HERC2-204ENST00000563945 KRT16P08779 473 aa18.56■□□□□ 0.56
HERC2-204ENST00000563945 ACVR1BP36896 505 aa18.56■□□□□ 0.56
HERC2-204ENST00000563945 SUMO3P55854 103 aaPredicted RBP18.56■□□□□ 0.56
HERC2-204ENST00000563945 BSPH1Q075Z2 132 aa18.56■□□□□ 0.56
HERC2-204ENST00000563945 PDE7AQ13946 482 aa18.56■□□□□ 0.56
HERC2-204ENST00000563945 RFTN2Q52LD8 501 aaPredicted RBP18.56■□□□□ 0.56
HERC2-204ENST00000563945 Q6ZSR9 355 aa18.56■□□□□ 0.56
HERC2-204ENST00000563945 DDIASQ8IXT1 998 aa18.56■□□□□ 0.56
HERC2-204ENST00000563945 RFWD2Q8NHY2 731 aa18.56■□□□□ 0.56
HERC2-204ENST00000563945 ZFP90Q8TF47 636 aa18.56■□□□□ 0.56
HERC2-204ENST00000563945 NEUROG1Q92886 237 aa18.56■□□□□ 0.56
HERC2-204ENST00000563945 FAM120BQ96EK7 910 aaKnown RBP18.56■□□□□ 0.56
HERC2-204ENST00000563945 ACTL7BQ9Y614 415 aa18.56■□□□□ 0.56
HERC2-204ENST00000563945 ABCA1O95477 2261 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 MAPK1P28482 360 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 CRHR1P34998 444 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 KRTAP1-1Q07627 177 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 MLC1Q15049 377 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 KLHL26Q53HC5 615 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 SSX8Q7RTT4 187 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 TDRPQ86YL5 185 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 TMCO5AQ8N6Q1 288 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 TOR1AIP2Q8NFQ8 470 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 KBTBD8Q8NFY9 601 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 OR2W6PQ8NHA6 318 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 MZB1Q8WU39 189 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 FCRL1Q96LA6 429 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 KLHDC3Q9BQ90 382 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 RHNO1Q9BSD3 238 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 TRMOQ9BU70 441 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 ACTRT3Q9BYD9 372 aa18.55■□□□□ 0.56
HERC2-204ENST00000563945 CISD1Q9NZ45 108 aaKnown RBP18.55■□□□□ 0.56
HERC2-204ENST00000563945 NPIPA5A0A0B4J1W7 369 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 NPIPA7E9PJI5 369 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 CD5LO43866 347 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 NPIPA8P0DM63 369 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 ENPP1P22413 925 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 CCT3P49368 545 aaKnown RBP18.54■□□□□ 0.56
HERC2-204ENST00000563945 RNF144AP50876 292 aaPredicted RBP18.54■□□□□ 0.56
HERC2-204ENST00000563945 CCR4P51679 360 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 ATP12AP54707 1039 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 RAC3P60763 192 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 RASGEF1BQ0VAM2 473 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 SELENBP1Q13228 472 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 TP53BP2Q13625 1128 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 CDC73Q6P1J9 531 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 CBLN3Q6UW01 205 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 DNAJC14Q6Y2X3 702 aaPredicted RBP18.54■□□□□ 0.56
HERC2-204ENST00000563945 Q6ZT83 130 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 ZNF100Q8IYN0 542 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 OR56A1Q8NGH5 318 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 OR2T11Q8NH01 316 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 GPR119Q8TDV5 335 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 MRGPRX4Q96LA9 322 aa18.54■□□□□ 0.56
HERC2-204ENST00000563945 IGHV3-15A0A0B4J1V0 119 aa18.53■□□□□ 0.56
HERC2-204ENST00000563945 DPRXA6NFQ7 191 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms