RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 BHLHA15Q7RTS1 189 aaPredicted RBP16.56■□□□□ 0.24
NME3-204ENST00000563498 C16orf58Q96GQ5 468 aa16.56■□□□□ 0.24
NME3-204ENST00000563498 STACQ99469 402 aa16.56■□□□□ 0.24
NME3-204ENST00000563498 HOXD1Q9GZZ0 328 aa16.56■□□□□ 0.24
NME3-204ENST00000563498 COQ10BQ9H8M1 238 aa16.56■□□□□ 0.24
NME3-204ENST00000563498 DUSP22Q9NRW4 184 aa16.56■□□□□ 0.24
NME3-204ENST00000563498 CISD1Q9NZ45 108 aaKnown RBP16.56■□□□□ 0.24
NME3-204ENST00000563498 KLHL9Q9P2J3 617 aa16.56■□□□□ 0.24
NME3-204ENST00000563498 ICAM5Q9UMF0 924 aa16.56■□□□□ 0.24
NME3-204ENST00000563498 CUBNO60494 3623 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 SLC28A1O00337 649 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 RGS14O43566 566 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 NDUFS7O75251 213 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 SDC1P18827 310 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 OR3A2P47893 321 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 P2RX1P51575 399 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 DNAJB13P59910 316 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 POU6F2P78424 691 aaPredicted RBP16.55■□□□□ 0.24
NME3-204ENST00000563498 MLC1Q15049 377 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 TMEM176BQ3YBM2 270 aaPredicted RBP16.55■□□□□ 0.24
NME3-204ENST00000563498 CFAP157Q5JU67 520 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 CCNJQ5T5M9 372 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 RNF165Q6ZSG1 346 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 TRMT10CQ7L0Y3 403 aaKnown RBP16.55■□□□□ 0.24
NME3-204ENST00000563498 ZNF527Q8NB42 609 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 NOA1Q8NC60 698 aaKnown RBP16.55■□□□□ 0.24
NME3-204ENST00000563498 FBXO27Q8NI29 283 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 PHOSPHO1Q8TCT1 267 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 ZFP90Q8TF47 636 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 MTERF3Q96E29 417 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 MRGPRX4Q96LA9 322 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 TNFRSF12AQ9NP84 129 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 SH3BP4Q9P0V3 963 aa16.55■□□□□ 0.24
NME3-204ENST00000563498 GDF2Q9UK05 429 aaPredicted RBP16.55■□□□□ 0.24
NME3-204ENST00000563498 SHISA9B4DS77 424 aa16.54■□□□□ 0.24
NME3-204ENST00000563498 H3BNH8 94 aa16.54■□□□□ 0.24
NME3-204ENST00000563498 GLRA3O75311 464 aa16.54■□□□□ 0.24
NME3-204ENST00000563498 ENPP1P22413 925 aa16.54■□□□□ 0.24
NME3-204ENST00000563498 RAC3P60763 192 aa16.54■□□□□ 0.24
NME3-204ENST00000563498 PPA1Q15181 289 aa16.54■□□□□ 0.24
NME3-204ENST00000563498 KLHL26Q53HC5 615 aa16.54■□□□□ 0.24
NME3-204ENST00000563498 CBLN3Q6UW01 205 aa16.54■□□□□ 0.24
NME3-204ENST00000563498 P2RY8Q86VZ1 359 aa16.54■□□□□ 0.24
NME3-204ENST00000563498 MZB1Q8WU39 189 aa16.54■□□□□ 0.24
NME3-204ENST00000563498 JADE3Q92613 823 aa16.54■□□□□ 0.24
NME3-204ENST00000563498 FAM120BQ96EK7 910 aaKnown RBP16.54■□□□□ 0.24
NME3-204ENST00000563498 RADILQ96JH8 1075 aa16.54■□□□□ 0.24
NME3-204ENST00000563498 TSSK3Q96PN8 268 aa16.54■□□□□ 0.24
NME3-204ENST00000563498 PSD2Q9BQI7 771 aa16.54■□□□□ 0.24
NME3-204ENST00000563498 RHNO1Q9BSD3 238 aa16.54■□□□□ 0.24
NME3-204ENST00000563498 PIGUQ9H490 435 aa16.54■□□□□ 0.24
NME3-204ENST00000563498 PSMC3IPQ9P2W1 217 aaPredicted RBP16.54■□□□□ 0.24
NME3-204ENST00000563498 ING1Q9UK53 422 aaPredicted RBP16.54■□□□□ 0.24
NME3-204ENST00000563498 FREM1Q5H8C1 2179 aa16.54■□□□□ 0.24
NME3-204ENST00000563498 GOLGA8QA0A0J9YX86 632 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 GOLGA8OA6NCC3 632 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 GOLGA8NF8WBI6 632 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 RIPK2O43353 540 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 AKAP10O43572 662 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 RAMP1O60894 148 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 URI1O94763 535 aaPredicted RBP16.53■□□□□ 0.24
NME3-204ENST00000563498 NUDT14O95848 222 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 HMGN2P05204 90 aaKnown RBP16.53■□□□□ 0.24
NME3-204ENST00000563498 FAM157CP0CG43 387 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 NEFHP12036 1026 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 PRKCAP17252 672 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 DDX5P17844 614 aaKnown RBP16.53■□□□□ 0.24
NME3-204ENST00000563498 ATP6V1C1P21283 382 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 SELENBP1Q13228 472 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 TIMM23BQ5SRD1 257 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 AGAP6Q5VW22 663 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 Q6ZSR9 355 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 GPR119Q8TDV5 335 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 MUCL1Q96DR8 90 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 OTUB1Q96FW1 271 aaPredicted RBP16.53■□□□□ 0.24
NME3-204ENST00000563498 CXorf36Q9H7Y0 433 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 ZCCHC3Q9NUD5 404 aaKnown RBP16.53■□□□□ 0.24
NME3-204ENST00000563498 TMED5Q9Y3A6 229 aa16.53■□□□□ 0.24
NME3-204ENST00000563498 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.53■□□□□ 0.24
NME3-204ENST00000563498 A0A096LNT2 108 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 ETV2O00321 342 aaPredicted RBP16.52■□□□□ 0.24
NME3-204ENST00000563498 OIP5O43482 229 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 LYZL6O75951 148 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 PROCP04070 461 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 COX5AP20674 150 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 ASMTP46597 345 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 CDH11P55287 796 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 DSCR9P59020 149 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 STK11Q15831 433 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 CCDC153Q494R4 210 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 SLC25A53Q5H9E4 307 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 C6orf52Q5T4I8 152 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 CLEC6AQ6EIG7 209 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 LRIG3Q6UXM1 1119 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.52■□□□□ 0.24
NME3-204ENST00000563498 R3HCC1LQ7Z5L2 792 aaKnown RBP16.52■□□□□ 0.24
NME3-204ENST00000563498 OR10H5Q8NGA6 315 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 CDS1Q92903 461 aa16.52■□□□□ 0.24
NME3-204ENST00000563498 ADAD1Q96M93 576 aaKnown RBP16.52■□□□□ 0.24
NME3-204ENST00000563498 SIRT3Q9NTG7 399 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms