RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 SELPLGQ14242 412 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 RPS26P11Q5JNZ5 115 aaPredicted RBP7.71□□□□□ -1.18
UBR1-204ENST00000563239 RAET1LQ5VY80 246 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 NSUN5P2Q63ZY6 315 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 TMEM211Q6ICI0 200 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 AAGABQ6PD74 315 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 POMZP3Q6PJE2 187 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 B3GNT6Q6ZMB0 384 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 GGNQ86UU5 652 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 LSRQ86X29 649 aaPredicted RBP7.71□□□□□ -1.18
UBR1-204ENST00000563239 LIX1LQ8IVB5 337 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 PM20D2Q8IYS1 436 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 GTPBP8Q8N3Z3 284 aaPredicted RBP7.71□□□□□ -1.18
UBR1-204ENST00000563239 ZNF614Q8N883 585 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 NAXEQ8NCW5 288 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 TNIP2Q8NFZ5 429 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 OR5W2Q8NH69 310 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 ZPLD1Q8TCW7 415 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 OIT3Q8WWZ8 545 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 PMM1Q92871 262 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 MAL2Q969L2 176 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 TMEM19Q96HH6 336 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 UCN2Q96RP3 112 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 TREX2Q9BQ50 279 aaPredicted RBP7.71□□□□□ -1.18
UBR1-204ENST00000563239 MTHFD2LQ9H903 347 aaPredicted RBP7.71□□□□□ -1.18
UBR1-204ENST00000563239 HHATLQ9HCP6 504 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 A4GALTQ9NPC4 353 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 PLEKHB1Q9UF11 243 aaPredicted RBP7.71□□□□□ -1.18
UBR1-204ENST00000563239 Q9UFV3 132 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 LEF1Q9UJU2 399 aaPredicted RBP7.71□□□□□ -1.18
UBR1-204ENST00000563239 VDAC3Q9Y277 283 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 CHST2Q9Y4C5 530 aa7.71□□□□□ -1.18
UBR1-204ENST00000563239 PHF3Q92576 2039 aaKnown RBP7.71□□□□□ -1.18
UBR1-204ENST00000563239 NBPF19A0A087WUL8 3843 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 CD8B2A6NJW9 211 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 H3BNH8 94 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 LINC01387J3KSC0 135 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 FXYD1O00168 92 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 GTPBP1O00178 669 aaKnown RBP7.7□□□□□ -1.18
UBR1-204ENST00000563239 CSTAP01040 98 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 BCHEP06276 602 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 ARAFP10398 606 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 PEPDP12955 493 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 PRKCAP17252 672 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 SHC1P29353 583 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 ADSLP30566 484 aaPredicted RBP7.7□□□□□ -1.18
UBR1-204ENST00000563239 GZMMP51124 257 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 SMSP52788 366 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 SUMO3P55854 103 aaPredicted RBP7.7□□□□□ -1.18
UBR1-204ENST00000563239 DLX5P56178 289 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 KCNJ10P78508 379 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 SRYQ05066 204 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 FOXF1Q12946 379 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 FADDQ13158 208 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 ART3Q13508 389 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 CTU2Q2VPK5 515 aaKnown RBP7.7□□□□□ -1.18
UBR1-204ENST00000563239 SLC25A53Q5H9E4 307 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 RIPPLY2Q5TAB7 128 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 XKRXQ6PP77 449 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 ENPP6Q6UWR7 440 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 EIF3MQ7L2H7 374 aaKnown RBP7.7□□□□□ -1.18
UBR1-204ENST00000563239 MAMDC2Q7Z304 686 aaPredicted RBP7.7□□□□□ -1.18
UBR1-204ENST00000563239 SPATA21Q7Z572 469 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 DHDDSQ86SQ9 333 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 VRK2Q86Y07 508 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 TREML1Q86YW5 311 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 EID3Q8N140 333 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 C9orf106Q8NAJ2 232 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 TOR1AIP2Q8NFQ8 470 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 LILRB4Q8NHJ6 448 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 CNOT9Q92600 299 aaKnown RBP7.7□□□□□ -1.18
UBR1-204ENST00000563239 RND1Q92730 232 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 ZBTB8AQ96BR9 441 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 DTNBP1Q96EV8 351 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 ADGRG7Q96K78 797 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 RNF145Q96MT1 663 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 ANKRD27Q96NW4 1050 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 TRIB1Q96RU8 372 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 CGREF1Q99674 301 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 ELAC2Q9BQ52 826 aaKnown RBP7.7□□□□□ -1.18
UBR1-204ENST00000563239 PIGQQ9BRB3 760 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 THUMPD3Q9BV44 507 aaKnown RBP7.7□□□□□ -1.18
UBR1-204ENST00000563239 MYLK2Q9H1R3 596 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 CALHM2Q9HA72 323 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 BCL2L10Q9HD36 194 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 ARMCX1Q9P291 453 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 CLCF1Q9UBD9 225 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 P2RX2Q9UBL9 471 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 AP4B1Q9Y6B7 739 aa7.7□□□□□ -1.18
UBR1-204ENST00000563239 FBN2P35556 2912 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 A0A0G2JPF8 293 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 LOC100653049A0A140TA62 436 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 GMNCA6NCL1 334 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 MBD3L4A6NDZ8 208 aaPredicted RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 MBD3L3A6NE82 208 aaPredicted RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 MBD3L5A6NJ08 208 aaPredicted RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 CLCA1A8K7I4 914 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 HNRNPCL2B2RXH8 293 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 HNRNPCL3B7ZW38 293 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms