RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 WDR4P57081 412 aaKnown RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 FKBP1BP68106 108 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 INSM1Q01101 510 aaPredicted RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 GRIK2Q13002 908 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 LYSMD4Q5XG99 296 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 TMEM225Q6GV28 225 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 ZFP1Q6P2D0 407 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 LRRC8BQ6P9F7 803 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 CYS1Q717R9 158 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 ADGRE4PQ86SQ3 457 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 THOC6Q86W42 341 aaKnown RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 RALGPS2Q86X27 583 aaPredicted RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 PDSS2Q86YH6 399 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 GPSM1Q86YR5 675 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 TDHQ8IZJ6 230 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 RIBC1Q8N443 379 aaPredicted RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 KYQ8NBH2 561 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 SLC44A5Q8NCS7 719 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 RNASE11Q8TAA1 199 aaKnown RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 IGSF8Q969P0 613 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 PELI1Q96FA3 418 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 ATF6BQ99941 703 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 CCDC3Q9BQI4 270 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 ZNF2Q9BSG1 426 aaPredicted RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 DCUN1D5Q9BTE7 237 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 ELOVL4Q9GZR5 314 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 PORCNQ9H237 461 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 VCX3AQ9NNX9 186 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 SSU72Q9NP77 194 aaKnown RBP4.39□□□□□ -1.71
SMG1-207ENST00000563235 SIT1Q9Y3P8 196 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 CLIC4Q9Y696 253 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 ALS2Q96Q42 1657 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 PPIAL4EA0A075B759 164 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 RFPL4AA6NLU0 287 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 E9PAM4 449 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 RFPL4AL1F8VTS6 287 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 TFECO14948 347 aaPredicted RBP4.38□□□□□ -1.71
SMG1-207ENST00000563235 CST8O60676 142 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 CEACAM4O75871 244 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 RGS11O94810 467 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 ETHE1O95571 254 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 GSRP00390 522 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 PRNPP04156 253 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 IFNA16P05015 189 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 PCCAP05165 728 aaPredicted RBP4.38□□□□□ -1.71
SMG1-207ENST00000563235 PPIAL4FP0DN26 164 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 VPREB1P12018 145 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 UQCRC1P31930 480 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 GNPDA1P46926 289 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 KCNQ1P51787 676 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 HMGCS2P54868 508 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 PLP1P60201 277 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 SORDQ00796 357 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 AESQ08117 197 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 SEMA3BQ13214 749 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 TPBGQ13641 420 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 CCNJQ5T5M9 372 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 LCTLQ6UWM7 567 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 MOB2Q70IA6 237 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 ZNF605Q86T29 641 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 PLA2G15Q8NCC3 412 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 OR52L2PQ8NGH6 319 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 OR10Q1Q8NGQ4 319 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 OR4Q3Q8NH05 313 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 PHF10Q8WUB8 498 aaKnown RBP4.38□□□□□ -1.71
SMG1-207ENST00000563235 TMEM239Q8WW34 195 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 TFGQ92734 400 aaPredicted RBP4.38□□□□□ -1.71
SMG1-207ENST00000563235 GGHQ92820 318 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 CDS1Q92903 461 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 FAM131CQ96AQ9 280 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 RPL10LQ96L21 214 aaKnown RBP4.38□□□□□ -1.71
SMG1-207ENST00000563235 AMDHD1Q96NU7 426 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 SEPT5Q99719 369 aaPredicted RBP4.38□□□□□ -1.71
SMG1-207ENST00000563235 SYT15Q9BQS2 421 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 CBWD1Q9BRT8 395 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 TMPRSS13Q9BYE2 586 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 RLIMQ9NVW2 624 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 RMND1Q9NWS8 449 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 ZNF282Q9UDV7 671 aaPredicted RBP4.38□□□□□ -1.71
SMG1-207ENST00000563235 PPIAL4AQ9Y536 164 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 IRAK3Q9Y616 596 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 ZMYM6O95789 1325 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 NHSQ6T4R5 1651 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 KCNE1BA0A087WTH5 132 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 A0A1W2PPE3 182 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 A0A1W2PQD8 194 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 TMEM213A2RRL7 107 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 PSMD12O00232 456 aaPredicted RBP4.38□□□□□ -1.71
SMG1-207ENST00000563235 AZIN1O14977 448 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 SURF4O15260 269 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 FOXN1O15353 648 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 RNMTO43148 476 aaKnown RBP4.38□□□□□ -1.71
SMG1-207ENST00000563235 CYP26A1O43174 497 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 TGOLN2O43493 480 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 SLC28A2O43868 658 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 SYNGR4O95473 234 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 NFATC1O95644 943 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 ERBB2P04626 1255 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 GLB1P16278 677 aa4.38□□□□□ -1.71
SMG1-207ENST00000563235 BMP7P18075 431 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms