RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 IGKV3D-11A0A0A0MRZ8 115 aa17.61■□□□□ 0.41
SMPD3-203ENST00000563226 WWP2O00308 870 aa17.61■□□□□ 0.41
SMPD3-203ENST00000563226 MYL12BO14950 172 aa17.61■□□□□ 0.41
SMPD3-203ENST00000563226 GPX5O75715 221 aa17.61■□□□□ 0.41
SMPD3-203ENST00000563226 SERPINB10P48595 397 aa17.61■□□□□ 0.41
SMPD3-203ENST00000563226 CDH11P55287 796 aa17.61■□□□□ 0.41
SMPD3-203ENST00000563226 SLC37A1P57057 533 aa17.61■□□□□ 0.41
SMPD3-203ENST00000563226 VWA2Q5GFL6 755 aa17.61■□□□□ 0.41
SMPD3-203ENST00000563226 KIRREL2Q6UWL6 708 aa17.61■□□□□ 0.41
SMPD3-203ENST00000563226 USP43Q70EL4 1123 aa17.61■□□□□ 0.41
SMPD3-203ENST00000563226 DEFB123Q8N688 67 aa17.61■□□□□ 0.41
SMPD3-203ENST00000563226 PELOQ9BRX2 385 aaKnown RBP17.61■□□□□ 0.41
SMPD3-203ENST00000563226 FGF20Q9NP95 211 aaPredicted RBP17.61■□□□□ 0.41
SMPD3-203ENST00000563226 HINT3Q9NQE9 182 aaKnown RBP17.61■□□□□ 0.41
SMPD3-203ENST00000563226 MMACHCQ9Y4U1 282 aa17.61■□□□□ 0.41
SMPD3-203ENST00000563226 TRAV27A0A087WT01 109 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 FAM183AA6NL82 134 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 AGRPO00253 132 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 ARRB1P49407 418 aaPredicted RBP17.6■□□□□ 0.41
SMPD3-203ENST00000563226 RAB40BQ12829 278 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 KLHL22Q53GT1 634 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 C3orf38Q5JPI3 329 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 OR2G6Q5TZ20 316 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 TMPRSS11FQ6ZWK6 438 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 PRSS42Q7Z5A4 293 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 IGFN1Q86VF2 1251 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 TMEM151BQ8IW70 566 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 PRSS58Q8IYP2 241 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 CADM2Q8N3J6 435 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 MVB12AQ96EY5 273 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 OR1F2PQ96R84 312 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 NDC1Q9BTX1 674 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 OR8D2Q9GZM6 311 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 PRODH2Q9UF12 536 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 ATXN7L1Q9ULK2 861 aaPredicted RBP17.6■□□□□ 0.41
SMPD3-203ENST00000563226 MUC3AQ02505 3323 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 CLDN25C9JDP6 229 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 BHLHE40O14503 412 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 SOCS6O14544 535 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 GNB5O14775 395 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 BMP4P12644 408 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 CD79BP40259 229 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 CTBP2P56545 445 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 DSG2Q14126 1118 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 ALG10BQ5I7T1 473 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 C16orf87Q6PH81 154 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 GPR135Q8IZ08 494 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 MFSD4AQ8N468 514 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 TMCO5AQ8N6Q1 288 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 OR4F15Q8NGB8 312 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 FNDC8Q8TC99 324 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 ZNF501Q96CX3 271 aaPredicted RBP17.6■□□□□ 0.41
SMPD3-203ENST00000563226 ZNF426Q9BUY5 554 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 TRIM2Q9C040 744 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 FBXO8Q9NRD0 319 aa17.6■□□□□ 0.41
SMPD3-203ENST00000563226 SERINC4A6NH21 518 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 METTL15A6NJ78 407 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 SAGP10523 405 aaPredicted RBP17.59■□□□□ 0.41
SMPD3-203ENST00000563226 FBLP22087 321 aaKnown RBP17.59■□□□□ 0.41
SMPD3-203ENST00000563226 EPHA8P29322 1005 aaPredicted RBP17.59■□□□□ 0.41
SMPD3-203ENST00000563226 TUBA1BP68363 451 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.59■□□□□ 0.41
SMPD3-203ENST00000563226 SLC35F1Q5T1Q4 408 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 WDR74Q6RFH5 385 aaPredicted RBP17.59■□□□□ 0.41
SMPD3-203ENST00000563226 SMARCD3Q6STE5 483 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 QSOX2Q6ZRP7 698 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 TUBA1AQ71U36 451 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 KANSL1Q7Z3B3 1105 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 CPOQ8IVL8 374 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 AMER2Q8N7J2 671 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 LSMEM1Q8N8F7 131 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 GATSQ8NAP1 163 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 OR7G1Q8NGA0 311 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 MCFD2Q8NI22 146 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 TRMT61AQ96FX7 289 aaKnown RBP17.59■□□□□ 0.41
SMPD3-203ENST00000563226 NXF5Q9H1B4 397 aaKnown RBP17.59■□□□□ 0.41
SMPD3-203ENST00000563226 EVA1AQ9H8M9 152 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 ZNF304Q9HCX3 659 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 FGF21Q9NSA1 209 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 MED17Q9NVC6 651 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 SIGLEC7Q9Y286 467 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 COL5A1P20908 1838 aaPredicted RBP17.59■□□□□ 0.41
SMPD3-203ENST00000563226 ADAMTS9Q9P2N4 1935 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 SNTNA6NMZ2 147 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 DDAH2O95865 285 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 CSTAP01040 98 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 FOXL2P58012 376 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 ZNF846Q147U1 533 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 GUSBP11Q6P575 273 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 B3GLCTQ6Y288 498 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 ZNF574Q6ZN55 896 aaPredicted RBP17.59■□□□□ 0.41
SMPD3-203ENST00000563226 MED25Q71SY5 747 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 BMP8AQ7Z5Y6 402 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 KBTBD8Q8NFY9 601 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 OR51A7Q8NH64 312 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 SLC2A12Q8TD20 617 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 TEX12Q9BXU0 123 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 MED20Q9H944 212 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 TMEM5Q9Y2B1 443 aa17.59■□□□□ 0.41
SMPD3-203ENST00000563226 DMDP11532 3685 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms