RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 AGFG2O95081 481 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 NPPAP01160 153 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 OPN1LWP04000 364 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 DBIP07108 87 aaKnown RBP15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 LINGO3P0C6S8 592 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 IL11P20809 199 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 SLC6A2P23975 617 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 RYKP34925 604 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 LHX2P50458 406 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 ZNF41P51814 821 aaPredicted RBP15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 TPD52P55327 224 aaPredicted RBP15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 GNA13Q14344 377 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 TMEM44Q2T9K0 475 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 GKAP1Q5VSY0 366 aaPredicted RBP15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 RTL6Q6ICC9 239 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 REEP3Q6NUK4 255 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 PLXDC2Q6UX71 529 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 CLEC18BQ6UXF7 455 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 ZNF836Q6ZNA1 936 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 ZZZ3Q8IYH5 903 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 ANKS4BQ8N8V4 417 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 CLEC18CQ8NCF0 446 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 FAM71CQ8NEG0 241 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 OR8J3Q8NGG0 315 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 OR5W2Q8NH69 310 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 ARL8BQ9NVJ2 186 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 CAMK2AQ9UQM7 478 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 MEMO1Q9Y316 297 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 A0A1B0GUH1 482 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 CCT8L1PA6NM43 557 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 ACTL6AO96019 429 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 NID1P14543 1247 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 MRPL2Q5T653 305 aaKnown RBP15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 NET1Q7Z628 596 aaPredicted RBP15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 ULK2Q8IYT8 1036 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 MARVELD2Q8N4S9 558 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 FAM26EQ8N5C1 309 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 FITM2Q8N6M3 262 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 BBS10Q8TAM1 723 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 PMM1Q92871 262 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 CMTM5Q96DZ9 223 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 RNF145Q96MT1 663 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 ECSITQ9BQ95 431 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 GPATCH1Q9BRR8 931 aaKnown RBP15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 EFCAB1Q9HAE3 211 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 CMTM6Q9NX76 183 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 DNAJB12Q9NXW2 375 aaKnown RBP15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 ZNF443Q9Y2A4 671 aaPredicted RBP15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 SLC35A3Q9Y2D2 325 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 FAM215AQ9Y5M1 114 aa15.78■□□□□ 0.12
CCNDBP1-204ENST00000563065 PCNX1Q96RV3 2341 aa15.77■□□□□ 0.12
CCNDBP1-204ENST00000563065 H3BML4 177 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 AP3D1O14617 1153 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 EFNA2O43921 213 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 GCM2O75603 506 aaPredicted RBP15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 DCTN3O75935 186 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 GKN3PP0CG01 181 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 ESRRAP11474 423 aaPredicted RBP15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 CHMP24386 653 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 PSMA4P25789 261 aaKnown RBP15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 NUDT2P50583 147 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 SUCLG1P53597 346 aaKnown RBP15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 CLDN15P56746 228 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 EEF1A1P68104 462 aaKnown RBP15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 FOXF1Q12946 379 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 ART3Q13508 389 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 QPRTQ15274 297 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 GLYR1Q49A26 553 aaPredicted RBP15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 PRAMEF8Q5VWM4 474 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 PRAMEF7Q5VXH5 474 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 AAGABQ6PD74 315 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 SERPINA11Q86U17 422 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 COMTD1Q86VU5 262 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 CALHM3Q86XJ0 350 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 UBQLNLQ8IYU4 475 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 CCDC197Q8NCU1 140 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 TOR1AIP2Q8NFQ8 470 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 FBXO27Q8NI29 283 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 OIT3Q8WWZ8 545 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 SMPDL3BQ92485 455 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 CCDC120Q96HB5 630 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 ZNF583Q96ND8 569 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 PIGQQ9BRB3 760 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 PRDM14Q9GZV8 571 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 TP63Q9H3D4 680 aaPredicted RBP15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 HHATLQ9HCP6 504 aa15.77■□□□□ 0.11
CCNDBP1-204ENST00000563065 A0A087WZY1 265 aa15.76■□□□□ 0.11
CCNDBP1-204ENST00000563065 TPST1O60507 370 aa15.76■□□□□ 0.11
CCNDBP1-204ENST00000563065 ZG16O60844 167 aa15.76■□□□□ 0.11
CCNDBP1-204ENST00000563065 LDLRP01130 860 aa15.76■□□□□ 0.11
CCNDBP1-204ENST00000563065 PABPC4LP0CB38 370 aaKnown RBP15.76■□□□□ 0.11
CCNDBP1-204ENST00000563065 PRKCAP17252 672 aa15.76■□□□□ 0.11
CCNDBP1-204ENST00000563065 ACVR2AP27037 513 aa15.76■□□□□ 0.11
CCNDBP1-204ENST00000563065 PRDX6P30041 224 aa15.76■□□□□ 0.11
CCNDBP1-204ENST00000563065 GCKP35557 465 aa15.76■□□□□ 0.11
CCNDBP1-204ENST00000563065 SUMO3P55854 103 aaPredicted RBP15.76■□□□□ 0.11
CCNDBP1-204ENST00000563065 CLDN18P56856 261 aa15.76■□□□□ 0.11
CCNDBP1-204ENST00000563065 CBFBQ13951 182 aa15.76■□□□□ 0.11
CCNDBP1-204ENST00000563065 LIN52Q52LA3 116 aa15.76■□□□□ 0.11
CCNDBP1-204ENST00000563065 ZNF311Q5JNZ3 666 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms