RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TCHHL1Q5QJ38 904 aaPredicted RBP4.6□□□□□ -1.67
HERC1-213ENST00000561359 SH2D4BQ5SQS7 431 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 HIST2H2AA3Q6FI13 130 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 CCBE1Q6UXH8 406 aaPredicted RBP4.6□□□□□ -1.67
HERC1-213ENST00000561359 ESPNLQ6ZVH7 1005 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 SPATC1Q76KD6 591 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 PRUNE1Q86TP1 453 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 ZNF786Q8N393 782 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 KIR3DL3Q8N743 410 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 LINC00482Q8N8I6 264 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 OR4M2Q8NGB6 313 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 CLDND2Q8NHS1 167 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 SLC35B2Q8TB61 432 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.6□□□□□ -1.67
HERC1-213ENST00000561359 LRRC58Q96CX6 371 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 SLC35A4Q96G79 324 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 ADGRG7Q96K78 797 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 CCDC42Q96M95 316 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 WWC2-AS2Q96NR7 200 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 MYCBPQ99417 103 aaPredicted RBP4.6□□□□□ -1.67
HERC1-213ENST00000561359 CITED1Q99966 193 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 SYT3Q9BQG1 590 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 CENPKQ9BS16 269 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 CAPS2Q9BXY5 557 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 MS4A8Q9BY19 250 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 TSGA10Q9BZW7 698 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 BRINP2Q9C0B6 783 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 OR51B5Q9H339 312 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 EHD1Q9H4M9 534 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 TMEM185BQ9H7F4 350 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 FN3KRPQ9HA64 309 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 SDHAF3Q9NRP4 125 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 PRSS50Q9UI38 385 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 FBXO9Q9UK97 447 aaPredicted RBP4.6□□□□□ -1.67
HERC1-213ENST00000561359 FBXO5Q9UKT4 447 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 VDAC3Q9Y277 283 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 MMP24Q9Y5R2 645 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 SLC25A15Q9Y619 301 aa4.6□□□□□ -1.67
HERC1-213ENST00000561359 A0A0J9YW62 118 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 A0A1B0GUS0 222 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 A0A1W2PR48 441 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 GOLGA6L10A6NI86 522 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 B9A039 149 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 C9JVG2 144 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 GOLGA6L19H0YKK7 550 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 PGRMC2O15173 223 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 TO15178 435 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 PRKD3O94806 890 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 GYPCP04921 128 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 MTHFD2P13995 350 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 ANPEPP15144 967 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 ZNF17P17021 662 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 DRD5P21918 477 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 FEN1P39748 380 aaKnown RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 GPR6P46095 362 aaPredicted RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 OR3A2P47893 321 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 PPOXP50336 477 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 XKP51811 444 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 CDKN2DP55273 166 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 RAB10P61026 200 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 BASP1P80723 227 aaKnown RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 MRPS22P82650 360 aaKnown RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 CBX1P83916 185 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 TIAL1Q01085 375 aaKnown RBP eCLIP4.59□□□□□ -1.67
HERC1-213ENST00000561359 IL1RL1Q01638 556 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 ZNHIT3Q15649 155 aaPredicted RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 TAF9Q16594 264 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 C18orf21Q32NC0 220 aaPredicted RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 ARL13AQ5H913 290 aaPredicted RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 ZNF311Q5JNZ3 666 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 PAGE2BQ5JRK9 111 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 SLC35F1Q5T1Q4 408 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 DCAF12L2Q5VW00 463 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 KHDRBS2Q5VWX1 349 aaKnown RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 ANKRD22Q5VYY1 191 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 RUSC1-AS1Q66K80 236 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 ASPHD2Q6ICH7 369 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 OR52E8Q6IFG1 317 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 C11orf63Q6NUN7 778 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 FAM111BQ6SJ93 734 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 CYP20A1Q6UW02 462 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 ZNF771Q7L3S4 317 aaPredicted RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 DOK3Q7L591 496 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 ZNF100Q8IYN0 542 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 Q8N1Y9 231 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 ZCCHC24Q8N2G6 241 aaKnown RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 UBE2J2Q8N2K1 259 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 ZNF433Q8N7K0 673 aaPredicted RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 CCDC89Q8N998 374 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 OR4K14Q8NGD5 310 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 OR52R1Q8NGF1 315 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 UHMK1Q8TAS1 419 aaKnown RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 CALML6Q8TD86 181 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 RNF128Q8TEB7 428 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 DUSP19Q8WTR2 217 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 ZNF473Q8WTR7 871 aaKnown RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 NEU4Q8WWR8 484 aaPredicted RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 GTF3AQ92664 365 aaKnown RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 RGMAQ96B86 450 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 ZNF669Q96BR6 464 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms