RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 PARM1Q6UWI2 310 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 SLC36A4Q6YBV0 504 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 LINC00471Q8N535 108 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 CAMKVQ8NCB2 501 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 FGF11Q92914 225 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 ELSPBP1Q96BH3 223 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 RNFT2Q96EX2 444 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 LRR1Q96L50 414 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 C12orf66Q96MD2 445 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 SARGQ9BW04 601 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 C1QTNF6Q9BXI9 259 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 C1QTNF2Q9BXJ5 285 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 ABCG4Q9H172 646 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 LHX9Q9NQ69 397 aa13.01□□□□□ -0.33
RABGGTA-220ENST00000560998 NUPL2O15504 423 aaKnown RBP13□□□□□ -0.33
RABGGTA-220ENST00000560998 OR10H3O60404 316 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 NCR1O76036 304 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 SOX30O94993 753 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 LPLP06858 475 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 CHRM5P08912 532 aaPredicted RBP13□□□□□ -0.33
RABGGTA-220ENST00000560998 GIPP09681 153 aaPredicted RBP13□□□□□ -0.33
RABGGTA-220ENST00000560998 SEC13P55735 322 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 EFNB1P98172 346 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 PITPNAQ00169 270 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 DYRK1AQ13627 763 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 GRM7Q14831 915 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 KIAA1161Q6NSJ0 714 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 FAM180BQ6P0A1 224 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 PGBD2Q6P3X8 592 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 LYPD4Q6UWN0 246 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 BAIAP2L2Q6UXY1 529 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 SPICQ8N5J4 248 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 OR5P2Q8WZ92 322 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 FGF14Q92915 247 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 CAMK1GQ96NX5 476 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 TIMM29Q9BSF4 260 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 DPH7Q9BTV6 452 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 TTYH1Q9H313 450 aaPredicted RBP13□□□□□ -0.33
RABGGTA-220ENST00000560998 METTL17Q9H7H0 456 aaPredicted RBP13□□□□□ -0.33
RABGGTA-220ENST00000560998 SLAMF7Q9NQ25 335 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 SLC35C2Q9NQQ7 365 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 COA4Q9NYJ1 87 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 ACTR10Q9NZ32 417 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 HNRNPCL2B2RXH8 293 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 D6RAR5 112 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 H7C2Y5 167 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 K7EQS6 105 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 ZNF593O00488 134 aaPredicted RBP13□□□□□ -0.33
RABGGTA-220ENST00000560998 NDUFS4O43181 175 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 LATO43561 262 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 OR1F1O43749 312 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 RP2O75695 350 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 GIFP27352 417 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 KIR2DL1P43626 348 aaPredicted RBP13□□□□□ -0.33
RABGGTA-220ENST00000560998 RPS21P63220 83 aaKnown RBP13□□□□□ -0.33
RABGGTA-220ENST00000560998 CSNK1G2P78368 415 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 SGCGQ13326 291 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 TMEM44Q2T9K0 475 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 IGSF11Q5DX21 431 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 TMEM184AQ6ZMB5 413 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 WDR53Q7Z5U6 358 aaPredicted RBP13□□□□□ -0.33
RABGGTA-220ENST00000560998 BCDIN3DQ7Z5W3 292 aaKnown RBP13□□□□□ -0.33
RABGGTA-220ENST00000560998 UBE3DQ7Z6J8 389 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 PDZD9Q8IXQ8 264 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 GPR135Q8IZ08 494 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 RAB42Q8N4Z0 105 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 FAM71CQ8NEG0 241 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 RGMAQ96B86 450 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 NEURL3Q96EH8 262 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 ELMOD3Q96FG2 381 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 YIPF4Q9BSR8 244 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 RPP25Q9BUL9 199 aaKnown RBP13□□□□□ -0.33
RABGGTA-220ENST00000560998 BTBD1Q9H0C5 482 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 NKX2-4Q9H2Z4 354 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 KCNK6Q9Y257 313 aa13□□□□□ -0.33
RABGGTA-220ENST00000560998 ATG2BQ96BY7 2078 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 SHISA3A0PJX4 238 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 FFAR1O14842 300 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 TMPRSS11DO60235 418 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 LCMT2O60294 686 aaKnown RBP12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 PEX14O75381 377 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 RGS9O75916 674 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 OR5F1O95221 314 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 RECKO95980 971 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 CEACAM5P06731 702 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 H1F0P07305 194 aaKnown RBP12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 LIMS3P0CW19 117 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 LIMS4P0CW20 117 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 TNFRSF4P43489 277 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 SMSP52788 366 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 RAP2BP61225 183 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 BDH1Q02338 343 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 LTB4RQ15722 352 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 PDSS1Q5T2R2 415 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 IDNKQ5T6J7 187 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 METTL11BQ5VVY1 283 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 SHFQ7M4L6 423 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 NUDT13Q86X67 352 aa12.99□□□□□ -0.33
RABGGTA-220ENST00000560998 STPG2Q8N412 459 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms