RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 LRRC37BQ96QE4 947 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 PRR14Q9BWN1 585 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 TMEM120AQ9BXJ8 343 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 HDHD5Q9BXW7 423 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 SRXN1Q9BYN0 137 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 NOL11Q9H8H0 719 aaKnown RBP8.77□□□□□ -1.01
TPM1-225ENST00000560679 SDHAF3Q9NRP4 125 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 CBLN4Q9NTU7 201 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 PAQR5Q9NXK6 330 aaPredicted RBP8.77□□□□□ -1.01
TPM1-225ENST00000560679 KLHL13Q9P2N7 655 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 MID2Q9UJV3 735 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 DCTN4Q9UJW0 460 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 OR10H1Q9Y4A9 318 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 ZNF780BQ9Y6R6 833 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 A0A0G2JND7 137 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 LOC100289279A0A1B0GTE1 492 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 C7orf72A4D263 438 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 SYCE1LA8MT33 242 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 VWC2LB2RUY7 222 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 H7C417 338 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 GUCY1B2O75343 617 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 LYZL6O75951 148 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 PSMG1O95456 288 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 ANGPTL1O95841 491 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 IGKV1D-16P01601 117 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 FESP07332 822 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 NQO1P15559 274 aaKnown RBP8.76□□□□□ -1.01
TPM1-225ENST00000560679 EGR1P18146 543 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 EDNRAP25101 427 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 TTKP33981 857 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 PCLAFQ15004 111 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 STK11Q15831 433 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 PLPPR5Q32ZL2 321 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 FAM174BQ3ZCQ3 159 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 SGO1Q5FBB7 561 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 SH2D4BQ5SQS7 431 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 LIPNQ5VXI9 398 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 FAM91A1Q658Y4 838 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 HBMQ6B0K9 141 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 BHLHA15Q7RTS1 189 aaPredicted RBP8.76□□□□□ -1.01
TPM1-225ENST00000560679 LCA5Q86VQ0 697 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 WDR75Q8IWA0 830 aaKnown RBP8.76□□□□□ -1.01
TPM1-225ENST00000560679 TUSC5Q8IXB3 177 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 C1orf52Q8N6N3 182 aaKnown RBP8.76□□□□□ -1.01
TPM1-225ENST00000560679 POC1BQ8TC44 478 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 SLC9A6Q92581 669 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 EXOSC8Q96B26 276 aaKnown RBP8.76□□□□□ -1.01
TPM1-225ENST00000560679 RNF145Q96MT1 663 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 GPR78Q96P69 363 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 LRMDAQ9H2I8 198 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 PFDN4Q9NQP4 134 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 SAR1AQ9NR31 198 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 THAP1Q9NVV9 213 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 AHSPQ9NZD4 102 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 PCTPQ9UKL6 214 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 PSME2Q9UL46 239 aa8.76□□□□□ -1.01
TPM1-225ENST00000560679 A0A096LPK6 155 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 IGHV4-61A0A0C4DH41 118 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 TCF21O43680 179 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 HNRNPCL1O60812 293 aaKnown RBP8.75□□□□□ -1.01
TPM1-225ENST00000560679 UTS2O95399 124 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 IL33O95760 270 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 PDYNP01213 254 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 C2P06681 752 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 IL3P08700 152 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 MYL2P10916 166 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 CPA3P15088 417 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 COX5AP20674 150 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 HNF1AP20823 631 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 CRABP2P29373 138 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 ARL1P40616 181 aaPredicted RBP8.75□□□□□ -1.01
TPM1-225ENST00000560679 CCNG1P51959 295 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 TRA2BP62995 288 aaKnown RBP8.75□□□□□ -1.01
TPM1-225ENST00000560679 RAC1P63000 192 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 ELF3P78545 371 aaPredicted RBP8.75□□□□□ -1.01
TPM1-225ENST00000560679 PRR5P85299 388 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 CSTF3Q12996 717 aaKnown RBP8.75□□□□□ -1.01
TPM1-225ENST00000560679 ITGADQ13349 1161 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 PPA1Q15181 289 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 PRSS53Q2L4Q9 553 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 GRAMD1BQ3KR37 738 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 GGTA1PQ4G0N0 100 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 CYP27C1Q4G0S4 372 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 METTL2BQ6P1Q9 378 aaKnown RBP8.75□□□□□ -1.01
TPM1-225ENST00000560679 C12orf54Q6X4T0 127 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 ESPNLQ6ZVH7 1005 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 RPS27LQ71UM5 84 aaKnown RBP8.75□□□□□ -1.01
TPM1-225ENST00000560679 ASRGL1Q7L266 308 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 MTDHQ86UE4 582 aaKnown RBP8.75□□□□□ -1.01
TPM1-225ENST00000560679 DEPDC4Q8N2C3 294 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 RFLNBQ8N5W9 214 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 KLHL15Q96M94 604 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 SIKE1Q9BRV8 207 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 SOX7Q9BT81 388 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 FAIM2Q9BWQ8 316 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 TMEM216Q9P0N5 145 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 CPSF2Q9P2I0 782 aaKnown RBP8.75□□□□□ -1.01
TPM1-225ENST00000560679 PRSS50Q9UI38 385 aa8.75□□□□□ -1.01
TPM1-225ENST00000560679 ING1Q9UK53 422 aaPredicted RBP8.75□□□□□ -1.01
TPM1-225ENST00000560679 ARFGEF3Q5TH69 2177 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms