RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 PLGP00747 810 aaPredicted RBP11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 C1QCP02747 245 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 SFTPDP35247 375 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 SUMO3P55854 103 aaPredicted RBP11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 RAC1P63000 192 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 SIRPAP78324 504 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 TLE4Q04727 773 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 ZNF141Q15928 474 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 SYPL1Q16563 259 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 HSP90B2PQ58FF3 399 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 COX20Q5RI15 118 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 HBMQ6B0K9 141 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 TYW3Q6IPR3 259 aaKnown RBP11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 DMRTC2Q8IXT2 367 aaPredicted RBP11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 LILRA2Q8N149 483 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 ZNF619Q8N2I2 560 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 OR5W2Q8NH69 310 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 FBXO27Q8NI29 283 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 FNDC9Q8TBE3 224 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 FIG4Q92562 907 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 RNASE6Q93091 150 aaKnown RBP11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 UCN2Q96RP3 112 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 KLHDC3Q9BQ90 382 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 CCDC28BQ9BUN5 200 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 THUMPD3Q9BV44 507 aaKnown RBP11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 NPHS2Q9NP85 383 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 POLE3Q9NRF9 147 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 DCTN4Q9UJW0 460 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 ICAM5Q9UMF0 924 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 LIPT1Q9Y234 373 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 L3MBTL1Q9Y468 752 aa11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 GPC6Q9Y625 555 aaPredicted RBP11.68□□□□□ -0.54
CTDSPL2-209ENST00000560620 MAST4O15021 2626 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 CENPVL1A0A0U1RR11 272 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 C7orf72A4D263 438 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 TMEM247A6NEH6 219 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 SYT5O00445 386 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 IL18BPO95998 194 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 LINGO3P0C6S8 592 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 FCGR2AP12318 317 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 IGFBP2P18065 325 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 RYKP34925 604 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 CPOXP36551 454 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 KIR2DL3P43628 341 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 EEF1A1P68104 462 aaKnown RBP11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 TXNL4AP83876 142 aaKnown RBP11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 CHRNEQ04844 493 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 FUT5Q11128 374 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 QPRTQ15274 297 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 TOMM34Q15785 309 aaPredicted RBP11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 TMEM44Q2T9K0 475 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 EEF1A1P5Q5VTE0 462 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 POMZP3Q6PJE2 187 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 SLC2A7Q6PXP3 512 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 FRRS1Q6ZNA5 592 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 MSANTD1Q6ZTZ1 278 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 GGNQ86UU5 652 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 TMEM200AQ86VY9 491 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 KIF18BQ86Y91 864 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 ZNF295-AS1Q8N0V1 137 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 ANKFN1Q8N957 763 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 OR10D3Q8NH80 312 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 ZNF563Q8TA94 476 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 GPR119Q8TDV5 335 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 ZFP90Q8TF47 636 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 ARSGQ96EG1 525 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 AURKBQ96GD4 344 aaPredicted RBP11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 REXO5Q96IC2 774 aaKnown RBP11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 TRNT1Q96Q11 434 aaKnown RBP11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 RBM24Q9BX46 236 aaKnown RBP11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 QRSL1Q9H0R6 528 aaKnown RBP11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 TPT1P8Q9HAU6 139 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 SLC6A13Q9NSD5 602 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 PAQR5Q9NXK6 330 aaPredicted RBP11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 P2RX2Q9UBL9 471 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 KCNE5Q9UJ90 142 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 FOXD3Q9UJU5 478 aaPredicted RBP11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 MCTS1Q9ULC4 181 aaKnown RBP11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 SLC35A3Q9Y2D2 325 aa11.67□□□□□ -0.54
CTDSPL2-209ENST00000560620 A0A0G2JND7 137 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 A0A1W2PNV4 684 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 GJE1A6NN92 205 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 CXCL13O43927 109 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 ZCCHC18P0CG32 403 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 ETFAP13804 333 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 IL7RP16871 459 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 PRKCAP17252 672 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 PGCP20142 388 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 IL11P20809 199 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 ELK4P28324 431 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 SLC7A1P30825 629 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 PEX19P40855 299 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 KCNJ5P48544 419 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 DLX5P56178 289 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 CARD18P57730 90 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 DSTNP60981 165 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 KCNJ10P78508 379 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 SKP2Q13309 424 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 GNA13Q14344 377 aa11.66□□□□□ -0.54
CTDSPL2-209ENST00000560620 FGFBP1Q14512 234 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms