RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 MSRB3Q8IXL7 192 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 PEX5LQ8IYB4 626 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 HIPK4Q8NE63 616 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 BHLHE22Q8NFJ8 381 aaPredicted RBP12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 B4GALNT2Q8NHY0 566 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 PNPT1Q8TCS8 783 aaKnown RBP12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 PHOSPHO1Q8TCT1 267 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 DUS3LQ96G46 650 aaKnown RBP12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 AURKBQ96GD4 344 aaPredicted RBP12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 VKORC1Q9BQB6 163 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 PCDHAC1Q9H158 963 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 SLC38A1Q9H2H9 487 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 BCL2L10Q9HD36 194 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 EXOSC3Q9NQT5 275 aaKnown RBP12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 FBXL2Q9UKC9 423 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 MKLN1Q9UL63 735 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 LRRC42Q9Y546 428 aa12.71□□□□□ -0.38
PKNOX1-209ENST00000560448 TRGV8A0A0C4DH27 118 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 C2orf72A6NCS6 295 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 AHRRA9YTQ3 701 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 GTPBP1O00178 669 aaKnown RBP12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 HCRTR2O43614 444 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 TNFRSF21O75509 655 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 PDE9AO76083 593 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 TPOP07202 933 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 C8BP07358 591 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 THBS1P07996 1170 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 CELA3AP09093 270 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 UBL4AP11441 157 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 ETFAP13804 333 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 ETS2P15036 469 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 TCN1P20061 433 aaPredicted RBP12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 RPS4Y1P22090 263 aaKnown RBP12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 VHLP40337 213 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 CASP9P55211 416 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 PDZK1Q5T2W1 519 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 GCNT6Q5T4J0 391 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 VASNQ6EMK4 673 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 TMEM211Q6ICI0 200 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 OR5M10Q6IEU7 315 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 NANOGP8Q6NSW7 305 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 SERPINA11Q86U17 422 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 BBS10Q8TAM1 723 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 SLC38A5Q8WUX1 472 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 ABTB1Q969K4 478 aaPredicted RBP12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 ARSGQ96EG1 525 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 CPPED1Q9BRF8 314 aaPredicted RBP12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 RTN4RQ9BZR6 473 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 PRDM14Q9GZV8 571 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 DSN1Q9H410 356 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 EVA1AQ9H8M9 152 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 NANOGQ9H9S0 305 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 ACAD8Q9UKU7 415 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 IFT52Q9Y366 437 aa12.7□□□□□ -0.38
PKNOX1-209ENST00000560448 GTF3C1Q12789 2109 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 TCRBV3S1A0A5B6 114 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 C5orf58C9J3I9 102 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 NPIPA2E9PIF3 369 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 NPIPA3F8WFD2 350 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 ZIC3O60481 467 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 CSTAP01040 98 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 BCHEP06276 602 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 CHRM4P08173 479 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 NID1P14543 1247 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 CPN1P15169 458 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 IL7RP16871 459 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 ELK4P28324 431 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 SLC6A8P48029 635 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 GFRA1P56159 465 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 SESN3P58005 492 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 KCNJ10P78508 379 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 HSF1Q00613 529 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 CRYZQ08257 329 aaKnown RBP12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 CBFBQ13951 182 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 CD226Q15762 336 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 SYPL1Q16563 259 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 FXNQ16595 210 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 GXYLT1Q4G148 440 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 LIN52Q52LA3 116 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 RABL3Q5HYI8 236 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 REEP3Q6NUK4 255 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 ZFP1Q6P2D0 407 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 RPTNQ6XPR3 784 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 FGD2Q7Z6J4 655 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 KRT73Q86Y46 540 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 ZNF440Q8IYI8 595 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 ZNF614Q8N883 585 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 ANKFN1Q8N957 763 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 FAM71CQ8NEG0 241 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 OR5W2Q8NH69 310 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 SLC35B4Q969S0 331 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 TREX2Q9BQ50 279 aaPredicted RBP12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 TACO1Q9BSH4 297 aaKnown RBP12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 THUMPD3Q9BV44 507 aaKnown RBP12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 SPATA5L1Q9BVQ7 753 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 LAT2Q9GZY6 243 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 SLC6A15Q9H2J7 730 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 MED11Q9P086 117 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 ICAM5Q9UMF0 924 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms