RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ZNF763Q0D2J5 394 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 ZNF155Q12901 538 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-214ENST00000560402 PTGR1Q14914 329 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 TAF11Q15544 211 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 FAM180BQ6P0A1 224 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 NPSR1Q6W5P4 371 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 AQP12AQ8IXF9 295 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 GCNT2Q8N0V5 402 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 RNF148Q8N7C7 305 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 VPS37AQ8NEZ2 397 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 C16orf78Q8WTQ4 265 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 PYDC1Q8WXC3 89 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 DNAJC9Q8WXX5 260 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 KAT2AQ92830 837 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 INTS12Q96CB8 462 aaKnown RBP12.27□□□□□ -0.45
SMAD3-214ENST00000560402 C11orf24Q96F05 449 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-214ENST00000560402 FCRL1Q96LA6 429 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 ALG2Q9H553 416 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 SLC52A3Q9NQ40 469 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 BEX4Q9NWD9 120 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-214ENST00000560402 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-214ENST00000560402 CD300AQ9UGN4 299 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 NDRG3Q9UGV2 375 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 MAGEL2Q9UJ55 1249 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 FBXL2Q9UKC9 423 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 OR10H1Q9Y4A9 318 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 TESMINQ9Y4I5 508 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 SNX13Q9Y5W8 968 aa12.27□□□□□ -0.45
SMAD3-214ENST00000560402 A0A1W2PNV4 684 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 PRORSD1PA6NEY8 169 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 A8MXE2 369 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 C9JVG2 144 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 LINC01387J3KSC0 135 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 FXYD1O00168 92 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 NME4O00746 187 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 ACOT8O14734 319 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 CASKO14936 926 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 C8BP07358 591 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 PEPDP12955 493 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 HOXB6P17509 224 aaKnown RBP12.26□□□□□ -0.45
SMAD3-214ENST00000560402 SDC1P18827 310 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 DDCP20711 480 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 PSMA4P25789 261 aaKnown RBP12.26□□□□□ -0.45
SMAD3-214ENST00000560402 IL12AP29459 219 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 EVI2BP34910 448 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 GAS1P54826 345 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 C21orf58P58505 322 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 CAPRIN1Q14444 709 aaKnown RBP12.26□□□□□ -0.45
SMAD3-214ENST00000560402 FGFBP1Q14512 234 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 KIAA0040Q15053 153 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 MTX3Q5HYI7 312 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 ANXA8L1Q5VT79 327 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 FAM219BQ5XKK7 198 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 SLC2A7Q6PXP3 512 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 CHMP1BQ7LBR1 199 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 P4HA3Q7Z4N8 544 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 R3HCC1LQ7Z5L2 792 aaKnown RBP12.26□□□□□ -0.45
SMAD3-214ENST00000560402 BIVMQ86UB2 503 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 SLC44A2Q8IWA5 706 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-214ENST00000560402 SLC15A3Q8IY34 581 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 PQLC1Q8N2U9 271 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 MEIOBQ8N635 442 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 FADS6Q8N9I5 356 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 APIPQ96GX9 242 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 TEX37Q96LM6 180 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 TSSK3Q96PN8 268 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 BBS4Q96RK4 519 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 CGREF1Q99674 301 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 ECSITQ9BQ95 431 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 NEUROD4Q9HD90 331 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 MIEF1Q9NQG6 463 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 SDHAF3Q9NRP4 125 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 ATAD3AQ9NVI7 634 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 FAM120CQ9NX05 1096 aaKnown RBP12.26□□□□□ -0.45
SMAD3-214ENST00000560402 PPP4R1LQ9P1A2 415 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 ACTR3BQ9P1U1 418 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 MRTO4Q9UKD2 239 aaKnown RBP12.26□□□□□ -0.45
SMAD3-214ENST00000560402 WBP11Q9Y2W2 641 aaKnown RBP12.26□□□□□ -0.45
SMAD3-214ENST00000560402 NAV3Q8IVL0 2385 aa12.26□□□□□ -0.45
SMAD3-214ENST00000560402 A0A096LPI6 279 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 TTC36A6NLP5 189 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 GSTA4O15217 222 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 TNFSF13O75888 250 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 GPIP06744 558 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 ANXA4P09525 319 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-214ENST00000560402 FCGR1AP12314 374 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 ACADSP16219 412 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 NTSP30990 170 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 PSMD4P55036 377 aaKnown RBP12.25□□□□□ -0.45
SMAD3-214ENST00000560402 PSG6Q00889 435 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 LIPEQ05469 1076 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 ZNHIT3Q15649 155 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-214ENST00000560402 PGS1Q32NB8 556 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 CYP27C1Q4G0S4 372 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 PAGE3Q5JUK9 113 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 SPANXN4Q5MJ08 99 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 SHEQ5VZ18 495 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 LCN8Q6JVE9 175 aa12.25□□□□□ -0.45
SMAD3-214ENST00000560402 OR7G2Q8NG99 324 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms