RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 CSF3P09919 207 aa17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 HMOX2P30519 316 aa17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 LCN1P31025 176 aa17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 GNG11P61952 73 aa17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 ETF1P62495 437 aaKnown RBP17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 VPS26BQ4G0F5 336 aa17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 TMEM108Q6UXF1 575 aa17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 GPRIN3Q6ZVF9 776 aa17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 ZNF433Q8N7K0 673 aaPredicted RBP17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 SLC16A11Q8NCK7 471 aa17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 OR6Y1Q8NGX8 325 aa17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 FBXO27Q8NI29 283 aa17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 ZNF524Q96C55 264 aa17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 PRR14Q9BWN1 585 aa17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 PLA2G12AQ9BZM1 189 aa17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 CHODLQ9H9P2 273 aa17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 KLHL9Q9P2J3 617 aa17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 WBP11Q9Y2W2 641 aaKnown RBP17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 UTP11Q9Y3A2 253 aaKnown RBP17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 TIMM22Q9Y584 194 aa17.41■□□□□ 0.38
RABGGTA-214ENST00000560163 IGHV3-15A0A0B4J1V0 119 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 LOC100289279A0A1B0GTE1 492 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 GJE1A6NN92 205 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 LY6HO94772 140 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 ACP2P11117 423 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 PTAFRP25105 342 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 CD40P25942 277 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 FABP6P51161 128 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 RAC3P60763 192 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 ZNF117Q03924 483 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 SQLEQ14534 574 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 ARL13AQ5H913 290 aaPredicted RBP17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 EXOSC6Q5RKV6 272 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 ZNF544Q6NX49 715 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 SLC22A25Q6T423 547 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 MMGT1Q8N4V1 131 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 CDRT4Q8N9R6 151 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 OR2W6PQ8NHA6 318 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 CDC26Q8NHZ8 85 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 ZFP90Q8TF47 636 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 C16orf45Q96MC5 204 aaPredicted RBP17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 KCNA7Q96RP8 456 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 FUT8Q9BYC5 575 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 ICAM5Q9UMF0 924 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 ACTL7BQ9Y614 415 aa17.4■□□□□ 0.38
RABGGTA-214ENST00000560163 C9JVG2 144 aa17.39■□□□□ 0.37
RABGGTA-214ENST00000560163 CBLN3Q6UW01 205 aa17.39■□□□□ 0.37
RABGGTA-214ENST00000560163 MEX3DQ86XN8 651 aaKnown RBP17.39■□□□□ 0.37
RABGGTA-214ENST00000560163 ZNF775Q96BV0 537 aaPredicted RBP17.39■□□□□ 0.37
RABGGTA-214ENST00000560163 TMEM237Q96Q45 408 aa17.39■□□□□ 0.37
RABGGTA-214ENST00000560163 ZNF300Q96RE9 604 aaPredicted RBP17.39■□□□□ 0.37
RABGGTA-214ENST00000560163 EML4Q9HC35 981 aaKnown RBP17.39■□□□□ 0.37
RABGGTA-214ENST00000560163 SLC25A15Q9Y619 301 aa17.39■□□□□ 0.37
RABGGTA-214ENST00000560163 ZNF724A8MTY0 619 aa17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 SMAD9O15198 467 aaKnown RBP17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 OIP5O43482 229 aa17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 CYTIPO60759 359 aa17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 DHRS4L1P0CG22 281 aa17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 HPGDP15428 266 aa17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 IMPDH1P20839 514 aa17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 RASGEF1BQ0VAM2 473 aa17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 HSPB3Q12988 150 aa17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 TOMM34Q15785 309 aaPredicted RBP17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 DUSP5Q16690 384 aa17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 SPDYAQ5MJ70 313 aa17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 CEP70Q8NHQ1 597 aa17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 FAM76AQ8TAV0 307 aa17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 C1orf159Q96HA4 380 aa17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 EGLN2Q96KS0 407 aa17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 POU2F3Q9UKI9 436 aa17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 GPC6Q9Y625 555 aaPredicted RBP17.38■□□□□ 0.37
RABGGTA-214ENST00000560163 SCDO00767 359 aa17.37■□□□□ 0.37
RABGGTA-214ENST00000560163 ENO1P06733 434 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-214ENST00000560163 HNF1AP20823 631 aa17.37■□□□□ 0.37
RABGGTA-214ENST00000560163 NR4A2P43354 598 aa17.37■□□□□ 0.37
RABGGTA-214ENST00000560163 ZNF83P51522 516 aa17.37■□□□□ 0.37
RABGGTA-214ENST00000560163 C2orf54Q08AI8 447 aa17.37■□□□□ 0.37
RABGGTA-214ENST00000560163 IKBIPQ70UQ0 350 aa17.37■□□□□ 0.37
RABGGTA-214ENST00000560163 MTERF4Q7Z6M4 381 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-214ENST00000560163 NUP43Q8NFH3 380 aa17.37■□□□□ 0.37
RABGGTA-214ENST00000560163 FBXO30Q8TB52 745 aa17.37■□□□□ 0.37
RABGGTA-214ENST00000560163 GPR119Q8TDV5 335 aa17.37■□□□□ 0.37
RABGGTA-214ENST00000560163 INPP5KQ9BT40 448 aa17.37■□□□□ 0.37
RABGGTA-214ENST00000560163 RAB17Q9H0T7 212 aa17.37■□□□□ 0.37
RABGGTA-214ENST00000560163 ZDHHC18Q9NUE0 388 aa17.37■□□□□ 0.37
RABGGTA-214ENST00000560163 NINJ2Q9NZG7 142 aa17.37■□□□□ 0.37
RABGGTA-214ENST00000560163 POLR3HQ9Y535 204 aaPredicted RBP17.37■□□□□ 0.37
RABGGTA-214ENST00000560163 ARFGEF3Q5TH69 2177 aa17.37■□□□□ 0.37
RABGGTA-214ENST00000560163 A0A1W2PNR3 127 aa17.36■□□□□ 0.37
RABGGTA-214ENST00000560163 NDUFS8O00217 210 aa17.36■□□□□ 0.37
RABGGTA-214ENST00000560163 SPRY1O43609 319 aaPredicted RBP17.36■□□□□ 0.37
RABGGTA-214ENST00000560163 PRKCAP17252 672 aa17.36■□□□□ 0.37
RABGGTA-214ENST00000560163 CFPP27918 469 aa17.36■□□□□ 0.37
RABGGTA-214ENST00000560163 PHBP35232 272 aa17.36■□□□□ 0.37
RABGGTA-214ENST00000560163 SERPINB4P48594 390 aa17.36■□□□□ 0.37
RABGGTA-214ENST00000560163 P2RX1P51575 399 aa17.36■□□□□ 0.37
RABGGTA-214ENST00000560163 PRKAG1P54619 331 aa17.36■□□□□ 0.37
RABGGTA-214ENST00000560163 FOXA1P55317 472 aa17.36■□□□□ 0.37
RABGGTA-214ENST00000560163 PKNOX1P55347 436 aa17.36■□□□□ 0.37
RABGGTA-214ENST00000560163 LCP2Q13094 533 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms